Basic Information
Locus ID:
pistato.v30028140
Species & Taxonomic ID:
Pistacia vera & 55513
Genome Assembly:
GWHBKLD00000000
Description:
Conserved oligomeric Golgi complex subunit
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 31694291 | 31702256 | + | pistato.v30028140 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.02 | 41,078.52 Da | 50.43 | 97.77 | -0.05 |
Protein Domain:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G24840.1 | 0 | |
| RefSeq | XP_044486987.1 | conserved oligomeric Golgi complex subunit 2 [Mangifera indica] | 0 |
| F4JRR1 | Conserved oligomeric Golgi complex subunit 2 OS=Arabidopsis thaliana OX=3702 GN=COG2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A067EBS1 | COG2_C domain-containing protein OS=Citrus sinensis OX=2711 GN=CISIN_1g004390mg PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 1 | jg13366 |
| Aizoaceae | Mesembryanthemum crystallinum | 1 | gene_19842 |
| Amaranthaceae | Atriplex hortensis | 1 | Ah001899 |
| Amaranthaceae | Beta vulgaris | 1 | BVRB_5g110470 |
| Amaranthaceae | Salicornia bigelovii | 2 | Sbi_jg31704, Sbi_jg57604 |
| Amaranthaceae | Salicornia europaea | 1 | Seu_jg25289 |
| Amaranthaceae | Suaeda aralocaspica | 3 | GOSA_00025085, GOSA_00025086, GOSA_00025087 |
| Amaranthaceae | Suaeda glauca | 4 | Sgl54199, Sgl54207, Sgl59544, Sgl59547 |
| Amaranthaceae | Chenopodium album | 4 | gene:ENSEOMG00000006094, gene:ENSEOMG00000021081 ... |
| Amaranthaceae | Chenopodium quinoa | 2 | CQ.Regalona.r1.5AG0015640, CQ.Regalona.r1.5BG0016820 |
| Anacardiaceae | Pistacia vera | 6 | pistato.v30028130, pistato.v30028140, pistato.v30099270 ... |
| Apiaceae | Apium graveolens | 1 | Ag5G00742 |
| Arecaceae | Cocos nucifera | 2 | COCNU_02G008740, COCNU_11G003040 |
| Arecaceae | Phoenix dactylifera | 1 | gene-LOC103710573 |
| Asparagaceae | Asparagus officinalis | 1 | AsparagusV1_04.1425.V1.1 |
| Asteraceae | Flaveria trinervia | 1 | Ftri18G32599 |
| Brassicaceae | Arabidopsis thaliana | 1 | AT4G24840.1 |
| Brassicaceae | Eutrema salsugineum | 1 | Thhalv10024490m.g.v1.0 |
| Brassicaceae | Schrenkiella parvula | 2 | Sp6g25960.v2.2, Sp7g22830.v2.2 |
| Brassicaceae | Brassica nigra | 2 | BniB02g081420.2N, BniB08g009180.2N |
| Casuarinaceae | Casuarina equisetifolia | 1 | Ceq04G1678 |
| Casuarinaceae | Casuarina glauca | 1 | Cgl04G1854 |
| Cymodoceaceae | Cymodocea nodosa | 1 | gene.Cymno05g01730 |
| Dunaliellaceae | Dunaliella salina | 3 | Dusal.0109s00025.v1.0, Dusal.0109s00026.v1.0 ... |
| Hydrocharitaceae | Thalassia testudinum | 1 | gene.Thate01g04970 |
| Nitrariaceae | Nitraria sibirica | 1 | evm.TU.LG10.1059 |
| Plantaginaceae | Plantago ovata | 1 | Pov_00033442 |
| Plumbaginaceae | Limonium bicolor | 1 | Lb5G27232 |
| Poaceae | Echinochloa crus-galli | 3 | AH01.575, BH01.156, CH09.3355 |
| Poaceae | Eleusine coracana subsp. coracana | 2 | gene-QOZ80_3AG0208390, gene-QOZ80_3BG0253470 |
| Poaceae | Hordeum vulgare | 1 | HORVU.MOREX.r3.5HG0533780.1 |
| Poaceae | Lolium multiflorum | 2 | gene-QYE76_056375, gene-QYE76_059951 |
| Poaceae | Oryza coarctata | 2 | Oco05G028860, Oco06G029910 |
| Poaceae | Oryza sativa | 1 | LOC_Os03g63250.1 |
| Poaceae | Paspalum vaginatum | 1 | gene-BS78_01G011300 |
| Poaceae | Puccinellia tenuiflora | 2 | Pt_Chr0106493, Pt_Chr0403192 |
| Poaceae | Sporobolus alterniflorus | 5 | Chr01G000500, Chr01G003460, Chr12G031920, Chr12G035320 ... |
| Poaceae | Triticum dicoccoides | 2 | gene_TRIDC4AG050660, gene_TRIDC5BG080190 |
| Poaceae | Triticum aestivum | 3 | TraesCS4A02G335400.1, TraesCS5B02G549700.1 ... |
| Poaceae | Zea mays | 2 | Zm00001eb064480_P002, Zm00001eb210790_P002 |
| Poaceae | Zoysia japonica | 2 | nbis-gene-15648, nbis-gene-16744 |
| Poaceae | Zoysia macrostachya | 2 | Zma_g2371, Zma_g63 |
| Portulacaceae | Portulaca oleracea | 2 | evm.TU.LG01.2809, evm.TU.LG21.200 |
| Posidoniaceae | Posidonia oceanica | 1 | gene.Posoc01g03810 |
| Rhizophoraceae | Bruguiera sexangula | 2 | evm.TU.Scaffold_11_RagTag.1124, evm.TU.Scaffold_4_RagTag.370 |
| Rhizophoraceae | Carallia pectinifolia | 1 | nbisL1-mrna-29001 |
| Rhizophoraceae | Ceriops tagal | 1 | nbisL1-mrna-11606 |
| Rhizophoraceae | Ceriops zippeliana | 1 | nbisL1-mrna-1941 |
| Rhizophoraceae | Kandelia candel | 1 | evm.TU.utg000008l.237 |
| Rhizophoraceae | Kandelia obovata | 1 | Maker00000473 |
| Rhizophoraceae | Rhizophora apiculata | 1 | nbisL1-mrna-14674 |
| Rhizophoraceae | Rhizophora mangle | 1 | nbisL1-mrna-1369 |
| Salicaceae | Populus euphratica | 2 | populus_peu28832, populus_peu30241 |
| Solanaceae | Lycium barbarum | 1 | gene-LOC132608837 |
| Solanaceae | Solanum chilense | 1 | SOLCI001248800 |
| Solanaceae | Solanum pennellii | 1 | gene-LOC107028694 |
| Tamaricaceae | Reaumuria soongarica | 1 | gene_6258 |
| Tamaricaceae | Tamarix chinensis | 1 | TC09G0852 |
| Zosteraceae | Zostera marina | 1 | Zosma01g33960.v3.1 |