Basic Information
Locus ID:
pistato.v30027820
Species & Taxonomic ID:
Pistacia vera & 55513
Genome Assembly:
GWHBKLD00000000
Description:
belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 31058434 | 31062401 | + | pistato.v30027820 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.39 | 50,643.55 Da | 45.72 | 85.86 | -0.49 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14134 | PKc_CLK | 84 | 429 | 8.04655E-171 | - |
| Pfam | PF00069 | Protein kinase domain | 97 | 429 | 7.8E-40 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 84 | 433 | 1.84E-64 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 84 | 177 | 3.5E-92 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 151 | 429 | 3.5E-92 | - |
| SMART | SM00220 | serkin_6 | 97 | 429 | 5.1E-48 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 97 | 429 | 32.597965 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 103 | 133 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 218 | 230 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G24740.1 | FUS3-complementing gene 2. a LAMMER-type protein kinase that co-precipitates with serine/arginine-rich (SR) proteins in vitro, interaction modulated by phosphorylation of the proteins. | 0 |
| RefSeq | XP_031247681.1 | LOW QUALITY PROTEIN: serine/threonine-protein kinase AFC2-like [Pistacia vera] | 0 |
| P51567 | Serine/threonine-protein kinase AFC2 OS=Arabidopsis thaliana OX=3702 GN=AFC2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A067GRG6 | Protein kinase domain-containing protein OS=Citrus sinensis OX=2711 GN=CISIN_1g047395mg PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology