Basic Information
Locus ID:
pistato.v30026840
Species & Taxonomic ID:
Pistacia vera & 55513
Genome Assembly:
GWHBKLD00000000
Description:
Homocysteine s-methyltransferase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 29038268 | 29041761 | + | pistato.v30026840 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.11 | 41,459.65 Da | 40.89 | 90.61 | -0.04 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF02574 | Homocysteine S-methyltransferase | 17 | 361 | 1.1E-72 | IPR003726 |
| SUPERFAMILY | SSF82282 | Homocysteine S-methyltransferase | 12 | 366 | 5.23E-78 | IPR036589 |
| Gene3D | G3DSA:3.20.20.330 | - | 6 | 361 | 4.9E-95 | IPR036589 |
| ProSiteProfiles | PS50970 | Homocysteine-binding domain profile. | 4 | 363 | 41.774876 | IPR003726 |
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G63250.1 | homocysteine methyltransferase 2. Encodes a homocysteine methyltransferase (HMT). Among the three HMT coding genes in the genome, HMT2 is responsible for a significant proportion of HMT activity in the flower stalks and silique hulls. However, HMT2 does not significantly contribute to the total HMT activity in seeds. | 0 |
| RefSeq | XP_031253090.1 | homocysteine S-methyltransferase 2-like [Pistacia vera] | 0 |
| Q9M1W4 | Homocysteine S-methyltransferase 2 OS=Arabidopsis thaliana OX=3702 GN=HMT-2 PE=1 SV=1 | 0 | |
| TrEMBL | V4VVG5 | Hcy-binding domain-containing protein OS=Citrus clementina OX=85681 GN=CICLE_v10020605mg PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology