Basic Information
Locus ID:
pistato.v30026400
Species & Taxonomic ID:
Pistacia vera & 55513
Genome Assembly:
GWHBKLD00000000
Description:
Cysteine-rich receptor-like protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 28404120 | 28406616 | - | pistato.v30026400 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.43 | 49,525.72 Da | 50.15 | 71.62 | -0.20 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 307 | 347 | 1.4E-8 | IPR001245 |
| Pfam | PF01657 | Salt stress response/antifungal | 65 | 164 | 4.2E-14 | IPR002902 |
| Pfam | PF01657 | Salt stress response/antifungal | 188 | 278 | 3.8E-13 | IPR002902 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 313 | 404 | 5.79E-13 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 280 | 419 | 6.0E-20 | - |
| Gene3D | G3DSA:3.30.430.20 | - | 59 | 167 | 6.6E-18 | IPR038408 |
| Gene3D | G3DSA:3.30.430.20 | - | 176 | 279 | 5.8E-26 | IPR038408 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 174 | 281 | 19.9377 | IPR002902 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 60 | 168 | 16.280653 | IPR002902 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G05200.1 | cysteine-rich RLK (RECEPTOR-like protein kinase) 25. Encodes a cysteine-rich receptor-like protein kinase. | 0 |
| RefSeq | XP_031255214.1 | cysteine-rich receptor-like protein kinase 25 [Pistacia vera] | 0 |
| Q9M0X5 | Cysteine-rich receptor-like protein kinase 25 OS=Arabidopsis thaliana OX=3702 GN=CRK25 PE=3 SV=1 | 0 | |
| TrEMBL | V4UJ78 | Receptor-like protein kinase At4g00960 OS=Citrus clementina OX=85681 GN=CICLE_v10014521mg PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Anacardiaceae | Pistacia vera | 3 | pistato.v30026400, pistato.v30030820, pistato.v30264300 |