Basic Information
Locus ID:
pistato.v30025850
Species & Taxonomic ID:
Pistacia vera & 55513
Genome Assembly:
GWHBKLD00000000
Description:
Belongs to the glycosyltransferase 8 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 27670440 | 27676048 | + | pistato.v30025850 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.85 | 89,542.50 Da | 44.54 | 84.72 | -0.44 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd06429 | GT8_like_1 | 355 | 651 | 1.30497E-115 | - |
| Pfam | PF01501 | Glycosyl transferase family 8 | 324 | 639 | 3.1E-87 | IPR002495 |
| Pfam | PF00445 | Ribonuclease T2 family | 668 | 737 | 1.2E-7 | IPR001568 |
| SUPERFAMILY | SSF53448 | Nucleotide-diphospho-sugar transferases | 355 | 654 | 3.09E-64 | IPR029044 |
| SUPERFAMILY | SSF55895 | Ribonuclease Rh-like | 669 | 741 | 6.28E-12 | IPR036430 |
| Gene3D | G3DSA:3.90.550.10 | Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A | 357 | 658 | 5.3E-41 | IPR029044 |
| Gene3D | G3DSA:3.90.730.10 | - | 667 | 743 | 2.5E-10 | IPR036430 |
Gene Ontology
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G38270.1 | galacturonosyltransferase 3. Encodes a protein with putative galacturonosyltransferase activity. | 0 |
| RefSeq | XP_031259017.1 | probable galacturonosyltransferase 3 [Pistacia vera] | 0 |
| Q0WQD2 | Probable galacturonosyltransferase 3 OS=Arabidopsis thaliana OX=3702 GN=GAUT3 PE=2 SV=2 | 0 | |
| TrEMBL | V4U8V9 | Hexosyltransferase OS=Citrus clementina OX=85681 GN=CICLE_v10027946mg PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology