Basic Information
Locus ID:
pistato.v30023880
Species & Taxonomic ID:
Pistacia vera & 55513
Genome Assembly:
GWHBKLD00000000
Description:
F-box protein SKIP14-like
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 25153300 | 25155666 | + | pistato.v30023880 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.85 | 47,903.12 Da | 40.59 | 82.27 | -0.18 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF12937 | F-box-like | 173 | 215 | 2.7E-7 | IPR001810 |
| SUPERFAMILY | SSF52047 | RNI-like | 222 | 308 | 6.8E-6 | - |
| SUPERFAMILY | SSF81383 | F-box domain | 173 | 216 | 1.19E-8 | IPR036047 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 213 | 319 | 6.5E-6 | IPR032675 |
| Gene3D | G3DSA:1.20.1280.50 | - | 171 | 212 | 1.1E-6 | - |
| ProSiteProfiles | PS50181 | F-box domain profile. | 172 | 213 | 9.550458 | IPR001810 |
| ProSitePatterns | PS00198 | 4Fe-4S ferredoxin-type iron-sulfur binding region signature. | 392 | 403 | - | IPR017900 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G26000.1 | Ribonuclease inhibitor. | 0 |
| RefSeq | XP_031283290.1 | F-box protein SKIP14-like [Pistacia vera] | 0 |
| Q9LU91 | F-box protein SKIP14 OS=Arabidopsis thaliana OX=3702 GN=SKIP14 PE=1 SV=1 | 0 | |
| TrEMBL | V4U3B6 | F-box domain-containing protein OS=Citrus clementina OX=85681 GN=CICLE_v10015170mg PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology