Basic Information
Locus ID:
pistato.v30022490
Species & Taxonomic ID:
Pistacia vera & 55513
Genome Assembly:
GWHBKLD00000000
Description:
PWWP domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 23750319 | 23753288 | - | pistato.v30022490 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.49 | 109,212.11 Da | 45.03 | 66.60 | -0.81 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd05162 | PWWP | 166 | 245 | 2.23665E-24 | - |
| Pfam | PF00855 | PWWP domain | 163 | 246 | 4.7E-15 | IPR000313 |
| SUPERFAMILY | SSF63748 | Tudor/PWWP/MBT | 161 | 263 | 7.22E-24 | - |
| Gene3D | G3DSA:2.30.30.140 | - | 152 | 259 | 1.1E-21 | - |
| SMART | SM00293 | PWWP_4 | 163 | 223 | 0.0017 | IPR000313 |
| ProSiteProfiles | PS50812 | PWWP domain profile. | 165 | 225 | 11.478404 | IPR000313 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 130 | 156 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 768 | 818 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 44 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 413 | 433 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 708 | 822 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 719 | 735 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 11 | 32 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 526 | 562 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 895 | 937 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 497 | 512 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 130 | 145 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 497 | 573 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 736 | 754 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 413 | 482 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G40340.1 | Tudor/PWWP/MBT superfamily protein. | 0 |
| RefSeq | XP_044466387.1 | uncharacterized protein LOC123196426 [Mangifera indica] | 0 |
| Q9FNE4 | PWWP domain-containing protein 3 OS=Arabidopsis thaliana OX=3702 GN=PDP3 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2H5P3B4 | PWWP domain-containing protein OS=Citrus unshiu OX=55188 GN=CUMW_099590 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology