Basic Information
Locus ID:
pistato.v30022470
Species & Taxonomic ID:
Pistacia vera & 55513
Genome Assembly:
GWHBKLD00000000
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 23746373 | 23747257 | + | pistato.v30022470 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.05 | 28,228.27 Da | 44.54 | 105.41 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF52058 | L domain-like | 46 | 241 | 2.13E-27 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 189 | 245 | 4.2E-6 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 30 | 188 | 8.1E-27 | IPR032675 |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G25910.1 | receptor like protein 52. putative disease resistance protein induced by chitin oligomers. | 0 |
| RefSeq | XP_020221358.1 | receptor-like protein kinase HSL1 [Cajanus cajan] | 0 |
| Q7FZR1 | Receptor-like protein 52 OS=Arabidopsis thaliana OX=3702 GN=RLP52 PE=2 SV=1 | 0 | |
| TrEMBL | A0A540KXM0 | Protein kinase domain-containing protein OS=Malus baccata OX=106549 GN=C1H46_035448 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Amaranthaceae | Atriplex hortensis | 1 | Ah035061 |
| Anacardiaceae | Pistacia vera | 1 | pistato.v30022470 |
| Apiaceae | Apium graveolens | 1 | Ag8G00331 |
| Asteraceae | Flaveria trinervia | 1 | Ftri3G30941 |
| Casuarinaceae | Casuarina glauca | 1 | Cgl01G0025 |
| Rhizophoraceae | Bruguiera sexangula | 1 | evm.TU.Scaffold_4_RagTag.1897 |