Basic Information
Locus ID:
pistato.v30021520
Species & Taxonomic ID:
Pistacia vera & 55513
Genome Assembly:
GWHBKLD00000000
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 21578687 | 21581818 | - | pistato.v30021520 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.49 | 96,379.68 Da | 33.13 | 104.20 | 0.07 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13855 | Leucine rich repeat | 571 | 629 | 2.5E-10 | IPR001611 |
| Pfam | PF13516 | Leucine Rich repeat | 353 | 366 | 1.6 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 26 | 64 | 6.3E-12 | IPR013210 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 754 | 867 | 2.02E-14 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 444 | 586 | 1.9E-13 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 86 | 661 | 2.21E-53 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 186 | 284 | 3.9E-24 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 26 | 185 | 2.1E-42 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 561 | 682 | 2.9E-34 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 732 | 828 | 3.1E-18 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 430 | 560 | 7.3E-13 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 285 | 410 | 1.4E-18 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 145 | 169 | 14.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 242 | 266 | 130.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 544 | 568 | 120.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 592 | 616 | 11.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 768 | 881 | 10.209708 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 774 | 797 | - | IPR017441 |
| PRINTS | PR00019 | Leucine-rich repeat signature | 592 | 605 | 3.9E-5 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 547 | 560 | 3.9E-5 | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G02130.2 | - | 0 |
| RefSeq | XP_031255823.1 | LRR receptor-like serine/threonine-protein kinase RPK2 [Pistacia vera] | 0 |
| Q9S7I6 | LRR receptor-like serine/threonine-protein kinase RPK2 OS=Arabidopsis thaliana OX=3702 GN=RPK2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5C7HDV9 | Protein kinase domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_020214 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology