Basic Information
Locus ID:
pistato.v30020990
Species & Taxonomic ID:
Pistacia vera & 55513
Genome Assembly:
GWHBKLD00000000
Description:
Belongs to the peptidase A1 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 20117968 | 20125693 | - | pistato.v30020990 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.45 | 88,314.59 Da | 48.16 | 80.81 | -0.28 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd05476 | pepsin_A_like_plant | 94 | 451 | 2.149E-81 | IPR034161 |
| Pfam | PF14604 | Variant SH3 domain | 735 | 783 | 3.2E-11 | IPR001452 |
| Pfam | PF14543 | Xylanase inhibitor N-terminal | 95 | 272 | 2.1E-54 | IPR032861 |
| Pfam | PF14541 | Xylanase inhibitor C-terminal | 296 | 447 | 2.8E-28 | IPR032799 |
| SUPERFAMILY | SSF103657 | BAR/IMD domain-like | 503 | 715 | 2.88E-24 | IPR027267 |
| SUPERFAMILY | SSF50044 | SH3-domain | 732 | 789 | 5.64E-15 | IPR036028 |
| SUPERFAMILY | SSF50630 | Acid proteases | 88 | 452 | 6.13E-91 | IPR021109 |
| Gene3D | G3DSA:1.20.1270.60 | Arfaptin homology (AH) domain/BAR domain | 502 | 717 | 6.8E-9 | IPR027267 |
| Gene3D | G3DSA:2.40.70.10 | Acid Proteases | 71 | 272 | 6.7E-55 | IPR021109 |
| Gene3D | G3DSA:2.30.30.40 | SH3 Domains | 718 | 797 | 5.6E-17 | - |
| Gene3D | G3DSA:2.40.70.10 | Acid Proteases | 275 | 459 | 1.0E-45 | IPR021109 |
| SMART | SM00326 | SH3_2 | 731 | 786 | 1.5E-12 | IPR001452 |
| ProSiteProfiles | PS50002 | Src homology 3 (SH3) domain profile. | 728 | 787 | 19.862251 | IPR001452 |
| ProSiteProfiles | PS51767 | Peptidase family A1 domain profile. | 95 | 447 | 44.886898 | IPR033121 |
| ProSitePatterns | PS00141 | Eukaryotic and viral aspartyl proteases active site. | 110 | 121 | - | IPR001969 |
| ProSitePatterns | PS00141 | Eukaryotic and viral aspartyl proteases active site. | 330 | 341 | - | IPR001969 |
| PRINTS | PR00792 | Pepsin (A1) aspartic protease family signature | 330 | 341 | 8.9E-5 | IPR001461 |
| PRINTS | PR00792 | Pepsin (A1) aspartic protease family signature | 101 | 121 | 8.9E-5 | IPR001461 |
| PRINTS | PR00792 | Pepsin (A1) aspartic protease family signature | 423 | 438 | 8.9E-5 | IPR001461 |
| Coils | Coil | Coil | 609 | 629 | - | - |
| Coils | Coil | Coil | 462 | 482 | - | - |
| Coils | Coil | Coil | 650 | 670 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G35615.1 | Eukaryotic aspartyl protease family protein. | 0 |
| RefSeq | XP_031247121.1 | probable aspartic protease At2g35615 [Pistacia vera] | 0 |
| Q3EBM5 | Probable aspartic protease At2g35615 OS=Arabidopsis thaliana OX=3702 GN=At2g35615 PE=3 SV=1 | 0 | |
| TrEMBL | A0A8S1ZKS3 | Genome assembly, chromosome: 1 OS=Arabidopsis arenosa OX=38785 GN=AARE701A_LOCUS2876 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology