Basic Information
Locus ID:
pistato.v30020400
Species & Taxonomic ID:
Pistacia vera & 55513
Genome Assembly:
GWHBKLD00000000
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 18708977 | 18712387 | + | pistato.v30020400 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.39 | 82,292.19 Da | 36.64 | 100.86 | -0.12 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13855 | Leucine rich repeat | 89 | 148 | 6.0E-10 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 21 | 61 | 9.9E-10 | IPR013210 |
| SUPERFAMILY | SSF52058 | L domain-like | 305 | 522 | 5.78E-41 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 47 | 305 | 2.89E-53 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 592 | 669 | 1.83E-11 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 184 | 257 | 5.5E-16 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 258 | 533 | 2.2E-73 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 20 | 179 | 3.3E-45 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 581 | 673 | 3.0E-13 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 599 | 741 | 9.96943 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 605 | 628 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G28440.1 | HAESA-like 1. | 0 |
| RefSeq | XP_031255310.1 | receptor-like protein kinase HSL1 [Pistacia vera] | 0 |
| Q9SGP2 | Receptor-like protein kinase HSL1 OS=Arabidopsis thaliana OX=3702 GN=HSL1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2H5PTB5 | Protein kinase domain-containing protein OS=Citrus unshiu OX=55188 GN=CUMW_165280 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
No orthogroup found for pistato.v30020400.