Basic Information
Locus ID:
pistato.v30018080
Species & Taxonomic ID:
Pistacia vera & 55513
Genome Assembly:
GWHBKLD00000000
Short Name:
CERK1
Description:
chitin elicitor receptor kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 15844721 | 15850187 | + | pistato.v30018080 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.49 | 75,536.28 Da | 38.04 | 95.63 | 0.03 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF01476 | LysM domain | 171 | 198 | 0.058 | IPR018392 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 375 | 660 | 1.7E-43 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 354 | 661 | 1.89E-72 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 354 | 443 | 7.8E-27 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 444 | 679 | 4.3E-53 | - |
| SMART | SM00220 | serkin_6 | 373 | 663 | 9.9E-33 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 373 | 664 | 37.95475 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 379 | 401 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 505 | 517 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G21630.1 | chitin elicitor receptor kinase 1. LysM receptor-like kinase. Essential in the perception and transduction of the chitin oligosaccharide elicitor. Involved in chitin-mediated plant innate immunity. Located in the plasma membrane. | 0 |
| RefSeq | XP_031276302.1 | lysM domain receptor-like kinase 3 [Pistacia vera] | 0 |
| Q6UD73 | LysM domain receptor-like kinase 3 OS=Medicago truncatula OX=3880 GN=LYK3 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5C7HFH8 | Protein kinase domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_020661 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology