Basic Information
Locus ID:
pistato.v30018030
Species & Taxonomic ID:
Pistacia vera & 55513
Genome Assembly:
GWHBKLD00000000
Description:
BAH and coiled-coil domain-containing protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 15782433 | 15787533 | + | pistato.v30018030 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.32 | 34,417.11 Da | 51.72 | 76.22 | -0.31 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd04714 | BAH_BAHCC1 | 22 | 156 | 7.43243E-58 | - |
| Pfam | PF01426 | BAH domain | 22 | 135 | 3.3E-24 | IPR001025 |
| Pfam | PF00628 | PHD-finger | 140 | 188 | 2.4E-10 | IPR019787 |
| SUPERFAMILY | SSF57903 | FYVE/PHD zinc finger | 130 | 189 | 2.02E-19 | IPR011011 |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 134 | 199 | 1.9E-20 | IPR013083 |
| Gene3D | G3DSA:2.30.30.490 | - | 1 | 133 | 5.9E-32 | IPR043151 |
| SMART | SM00439 | BAH_4 | 21 | 136 | 5.5E-43 | IPR001025 |
| SMART | SM00249 | PHD_3 | 140 | 187 | 4.9E-10 | IPR001965 |
| ProSiteProfiles | PS50016 | Zinc finger PHD-type profile. | 138 | 189 | 9.2141 | IPR019787 |
| ProSiteProfiles | PS51038 | BAH domain profile. | 21 | 136 | 23.667469 | IPR001025 |
| ProSitePatterns | PS01359 | Zinc finger PHD-type signature. | 141 | 186 | - | IPR019786 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G22140.2 | PHD finger family protein / bromo-adjacent homology (BAH) domain-containing protein. | 0 |
| RefSeq | XP_031276303.1 | chromatin remodeling protein EBS-like isoform X1 [Pistacia vera] | 0 |
| F4JL28 | Chromatin remodeling protein EBS OS=Arabidopsis thaliana OX=3702 GN=EBS PE=1 SV=1 | 0 | |
| TrEMBL | A0A4S4D070 | Chromatin remodeling protein EBS-like OS=Camellia sinensis var. sinensis OX=542762 GN=TEA_013476 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology