Basic Information
Locus ID:
pistato.v30015380
Species & Taxonomic ID:
Pistacia vera & 55513
Genome Assembly:
GWHBKLD00000000
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 13052850 | 13056015 | + | pistato.v30015380 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.74 | 94,958.93 Da | 31.27 | 102.61 | 0.01 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13855 | Leucine rich repeat | 105 | 164 | 1.4E-6 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 177 | 235 | 1.4E-7 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 32 | 77 | 1.3E-6 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 537 | 596 | 3.1E-9 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 715 | 801 | 3.1E-10 | IPR000719 |
| SUPERFAMILY | SSF52047 | RNI-like | 84 | 358 | 3.14E-57 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 710 | 798 | 6.59E-14 | IPR011009 |
| SUPERFAMILY | SSF52047 | RNI-like | 264 | 601 | 2.98E-69 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 33 | 149 | 4.4E-26 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 708 | 791 | 8.0E-16 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 150 | 227 | 2.6E-22 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 228 | 390 | 2.5E-53 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 391 | 631 | 2.0E-71 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 103 | 127 | 330.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 464 | 487 | 300.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 439 | 463 | 15.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 295 | 319 | 20.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 559 | 583 | 110.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 199 | 223 | 20.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 343 | 367 | 120.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 713 | 876 | 9.559545 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 719 | 742 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 844 | 864 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G28650.1 | Leucine-rich repeat transmembrane protein kinase family protein. | 0 |
| RefSeq | XP_031268911.1 | MDIS1-interacting receptor like kinase 1 [Pistacia vera] | 0 |
| Q9M0G7 | MDIS1-interacting receptor like kinase 1 OS=Arabidopsis thaliana OX=3702 GN=MIK1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A067FA40 | Protein kinase domain-containing protein OS=Citrus sinensis OX=2711 GN=CISIN_1g001752mg PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology