Basic Information
Locus ID:
pistato.v30010920
Species & Taxonomic ID:
Pistacia vera & 55513
Genome Assembly:
GWHBKLD00000000
Description:
Phytosulfokine precursor protein (PSK)
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 9182769 | 9185472 | + | pistato.v30010920 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.62 | 64,540.71 Da | 66.45 | 61.18 | -0.79 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF06404 | Phytosulfokine precursor protein (PSK) | 45 | 74 | 4.8E-8 | IPR009438 |
| Pfam | PF06404 | Phytosulfokine precursor protein (PSK) | 400 | 434 | 9.5E-9 | IPR009438 |
| Pfam | PF06404 | Phytosulfokine precursor protein (PSK) | 447 | 479 | 5.4E-9 | IPR009438 |
| Pfam | PF06404 | Phytosulfokine precursor protein (PSK) | 85 | 119 | 8.5E-9 | IPR009438 |
| Pfam | PF06404 | Phytosulfokine precursor protein (PSK) | 266 | 299 | 1.3E-8 | IPR009438 |
| Pfam | PF06404 | Phytosulfokine precursor protein (PSK) | 310 | 344 | 9.2E-9 | IPR009438 |
| Pfam | PF06404 | Phytosulfokine precursor protein (PSK) | 355 | 389 | 1.0E-8 | IPR009438 |
| Pfam | PF06404 | Phytosulfokine precursor protein (PSK) | 175 | 209 | 9.0E-9 | IPR009438 |
| Pfam | PF06404 | Phytosulfokine precursor protein (PSK) | 491 | 524 | 7.4E-10 | IPR009438 |
| Pfam | PF06404 | Phytosulfokine precursor protein (PSK) | 130 | 164 | 9.3E-9 | IPR009438 |
| Pfam | PF06404 | Phytosulfokine precursor protein (PSK) | 222 | 254 | 4.9E-9 | IPR009438 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 542 | 585 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 550 | 564 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 565 | 585 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G49780.1 | phytosulfokine 4 precursor. Phytosulfokine 3 precursor, coding for a unique plant peptide growth factor. Plants overexpressing this gene (under a 35S promoter), develop normal cotyledons and hypocotyls but their growth, in particular that of their roots, was faster than that of wildtype. | 0 |
| RefSeq | XP_031283962.1 | uncharacterized protein LOC116142678 [Pistacia vera] | 0 |
| Q9M2Y0 | Phytosulfokines 3 OS=Arabidopsis thaliana OX=3702 GN=PSK3 PE=2 SV=2 | 0 | |
| TrEMBL | A0A835DIH0 | Phytosulfokine OS=Tetracentron sinense OX=13715 GN=HHK36_009737 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology