Basic Information
Locus ID:
pistato.v30009880
Species & Taxonomic ID:
Pistacia vera & 55513
Genome Assembly:
GWHBKLD00000000
Description:
May serve as docking site to facilitate the association of other proteins to the plasma membrane
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 6743380 | 6746223 | + | pistato.v30009880 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.13 | 18,205.94 Da | 37.86 | 83.68 | -0.15 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd01814 | Ubl_MUBs_plant | 43 | 130 | 3.97333E-50 | - |
| Pfam | PF13881 | Ubiquitin-2 like Rad60 SUMO-like | 42 | 136 | 1.1E-35 | IPR039540 |
| SUPERFAMILY | SSF54236 | Ubiquitin-like | 39 | 133 | 2.59E-26 | IPR029071 |
| Gene3D | G3DSA:3.10.20.90 | - | 28 | 136 | 8.4E-44 | - |
| ProSiteProfiles | PS50053 | Ubiquitin domain profile. | 43 | 115 | 10.005006 | IPR000626 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G22050.1 | membrane-anchored ubiquitin-fold protein 6 precursor. | 0 |
| RefSeq | XP_031259083.1 | membrane-anchored ubiquitin-fold protein 3-like [Pistacia vera] | 0 |
| Q6Z8K4 | Membrane-anchored ubiquitin-fold protein 3 OS=Oryza sativa subsp. japonica OX=39947 GN=MUB3 PE=3 SV=1 | 0 | |
| TrEMBL | A0A5C7I3C4 | Ubiquitin-like domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_010502 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology