Basic Information
Locus ID:
pistato.v30008050
Species & Taxonomic ID:
Pistacia vera & 55513
Genome Assembly:
GWHBKLD00000000
Description:
PAPA-1-like conserved region
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 5463780 | 5467681 | + | pistato.v30008050 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.82 | 77,007.29 Da | 55.28 | 69.63 | -0.74 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF04795 | PAPA-1-like conserved region | 540 | 625 | 1.4E-21 | IPR006880 |
| SMART | SM01406 | PAPA_1_2 | 540 | 625 | 4.0E-31 | IPR006880 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 135 | 179 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 275 | 332 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 396 | 428 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 279 | 322 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 531 | 589 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 497 | 517 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 438 | 455 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 225 | 259 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 468 | 496 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 347 | 589 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 143 | 173 | - | - |
| Coils | Coil | Coil | 539 | 566 | - | - |
Gene Ontology
Cellular Component:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G47350.1 | HIT zinc finger ;PAPA-1-like conserved region. | 0 |
| RefSeq | XP_031250386.1 | uncharacterized protein LOC116108271 [Pistacia vera] | 0 |
| TrEMBL | A0A5C7I2R3 | PAPA-1 domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_010282 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology