Basic Information
Locus ID:
pistato.v30006980
Species & Taxonomic ID:
Pistacia vera & 55513
Genome Assembly:
GWHBKLD00000000
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 4741128 | 4744487 | - | pistato.v30006980 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.95 | 123,133.34 Da | 40.41 | 99.29 | 0.03 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 847 | 1115 | 3.32225E-89 | - |
| Pfam | PF00560 | Leucine Rich Repeat | 390 | 412 | 1.6 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 842 | 1042 | 1.7E-43 | IPR000719 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 45 | 85 | 3.5E-13 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 605 | 663 | 9.6E-11 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 269 | 325 | 1.3E-9 | IPR001611 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 826 | 1113 | 1.62E-72 | IPR011009 |
| SUPERFAMILY | SSF52047 | RNI-like | 132 | 454 | 2.2E-53 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 538 | 718 | 1.7E-35 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 917 | 1118 | 2.0E-56 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 532 | 734 | 1.0E-47 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 348 | 527 | 1.3E-29 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 43 | 241 | 6.2E-45 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 242 | 335 | 2.0E-22 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 804 | 916 | 1.4E-28 | - |
| SMART | SM00369 | LRR_typ_2 | 243 | 267 | 280.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 841 | 1105 | 1.2E-36 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 651 | 675 | 12.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 291 | 315 | 14.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 146 | 170 | 160.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 194 | 217 | 380.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 603 | 627 | 42.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 841 | 1115 | 39.085468 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 961 | 973 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 847 | 869 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 737 | 767 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G02130.2 | - | 0 |
| RefSeq | XP_031257971.1 | LRR receptor-like serine/threonine-protein kinase RPK2 [Pistacia vera] | 0 |
| Q9S7I6 | LRR receptor-like serine/threonine-protein kinase RPK2 OS=Arabidopsis thaliana OX=3702 GN=RPK2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5C7I0U7 | Protein kinase domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_010157 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology