Basic Information
Locus ID:
pistato.v30006370
Species & Taxonomic ID:
Pistacia vera & 55513
Genome Assembly:
GWHBKLD00000000
Description:
transcription factor
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 4321962 | 4323428 | + | pistato.v30006370 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.62 | 54,489.57 Da | 52.99 | 80.84 | -0.50 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd11449 | bHLH_AtAIB_like | 311 | 387 | 4.47466E-41 | - |
| Pfam | PF14215 | bHLH-MYC and R2R3-MYB transcription factors N-terminal | 26 | 212 | 9.3E-58 | IPR025610 |
| Pfam | PF00010 | Helix-loop-helix DNA-binding domain | 317 | 362 | 2.7E-10 | IPR011598 |
| SUPERFAMILY | SSF47459 | HLH, helix-loop-helix DNA-binding domain | 314 | 375 | 2.88E-17 | IPR036638 |
| Gene3D | G3DSA:4.10.280.10 | - | 311 | 379 | 8.1E-16 | IPR036638 |
| SMART | SM00353 | finulus | 319 | 368 | 9.9E-16 | IPR011598 |
| ProSiteProfiles | PS50888 | Myc-type, basic helix-loop-helix (bHLH) domain profile. | 313 | 362 | 17.015257 | IPR011598 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 299 | 323 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 386 | 404 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 307 | 323 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 383 | 404 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 21 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 260 | 285 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 261 | 282 | - | - |
| Coils | Coil | Coil | 359 | 379 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G00870.1 | basic helix-loop-helix (bHLH) DNA-binding superfamily protein. | 0 |
| RefSeq | XP_031251019.1 | transcription factor MYC2 [Pistacia vera] | 0 |
| O23090 | Transcription factor bHLH14 OS=Arabidopsis thaliana OX=3702 GN=BHLH14 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5C7I202 | BHLH domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_010079 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology