Basic Information
Locus ID:
pistato.v30000900
Species & Taxonomic ID:
Pistacia vera & 55513
Genome Assembly:
GWHBKLD00000000
Description:
receptor-like serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 453355 | 456988 | - | pistato.v30000900 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.14 | 73,492.33 Da | 35.74 | 95.65 | -0.10 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd12087 | TM_EGFR-like | 296 | 334 | 1.1951E-5 | - |
| CDD | cd14066 | STKc_IRAK | 410 | 669 | 1.77692E-88 | - |
| Pfam | PF00560 | Leucine Rich Repeat | 210 | 232 | 0.39 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 138 | 197 | 2.5E-8 | IPR001611 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 408 | 666 | 1.7E-41 | IPR001245 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 21 | 62 | 1.7E-8 | IPR013210 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 382 | 667 | 3.56E-57 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 21 | 232 | 4.91E-42 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 375 | 482 | 7.7E-24 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 176 | 247 | 7.4E-16 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 21 | 175 | 4.9E-47 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 483 | 672 | 5.0E-43 | - |
| SMART | SM00220 | serkin_6 | 404 | 670 | 2.5E-12 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 404 | 670 | 31.467243 | IPR000719 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G45340.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_031269597.1 | probable LRR receptor-like serine/threonine-protein kinase At4g36180 isoform X1 [Pistacia vera] | 0 |
| Q93YN1 | Cold-responsive protein kinase 1 OS=Arabidopsis thaliana OX=3702 GN=CRPK1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5C7I042 | Protein kinase domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_009681 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology