Basic Information
Locus ID:
pistato.v30000880
Species & Taxonomic ID:
Pistacia vera & 55513
Genome Assembly:
GWHBKLD00000000
Description:
receptor-like serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 441230 | 444729 | - | pistato.v30000880 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.77 | 63,273.92 Da | 37.77 | 93.95 | -0.15 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 312 | 571 | 7.49467E-89 | - |
| CDD | cd12087 | TM_EGFR-like | 198 | 236 | 1.73703E-5 | - |
| Pfam | PF00560 | Leucine Rich Repeat | 112 | 134 | 0.32 | IPR001611 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 310 | 568 | 1.2E-41 | IPR001245 |
| Pfam | PF13855 | Leucine rich repeat | 40 | 99 | 2.0E-8 | IPR001611 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 284 | 569 | 2.42E-57 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 12 | 149 | 7.94E-31 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 2 | 173 | 1.7E-38 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 277 | 384 | 6.0E-24 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 385 | 574 | 3.7E-43 | - |
| SMART | SM00220 | serkin_6 | 306 | 572 | 2.5E-12 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 306 | 572 | 31.467243 | IPR000719 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G45340.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_031269598.1 | LRR receptor kinase BAK1 isoform X2 [Pistacia vera] | 0 |
| Q93YN1 | Cold-responsive protein kinase 1 OS=Arabidopsis thaliana OX=3702 GN=CRPK1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5C7I042 | Protein kinase domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_009681 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology