Basic Information
Locus ID:
nbisL1-mrna-9948
Species & Taxonomic ID:
Hibiscus hamabo Siebold & Zucc. & 1841
Short Name:
CPK14
Description:
Calcium-dependent protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3 | 3572255 | 3576054 | - | nbisL1-mrna-9948 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.81 | 44,065.74 Da | 37.68 | 94.86 | -0.09 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 95 | 271 | 7.6E-21 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 92 | 297 | 9.95E-27 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 90 | 272 | 3.1E-32 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 92 | 109 | 3.1E-32 | - |
| SMART | SM00220 | serkin_6 | 28 | 272 | 3.0E-9 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 4 | 273 | 14.84566 | IPR000719 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G57530.2 | - | 0 |
| RefSeq | XP_017623241.1 | PREDICTED: calcium-dependent protein kinase 32-like isoform X2 [Gossypium arboreum] | 0 |
| Q84SL0 | Calcium-dependent protein kinase 20 OS=Oryza sativa subsp. japonica OX=39947 GN=CPK20 PE=2 SV=2 | 0 | |
| TrEMBL | A0A6P4N5P1 | calcium-dependent protein kinase 32-like isoform X2 OS=Gossypium arboreum OX=29729 GN=LOC108467189 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
No orthogroup found for nbisL1-mrna-9948.