Basic Information
Locus ID:
nbisL1-mrna-9921
Species & Taxonomic ID:
Ceriops zippeliana & 413951
Genome Assembly:
GCA_037897445.1
Short Name:
AFC1
Description:
serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 000011F_pilon | 3584675 | 3590508 | + | nbisL1-mrna-9921 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.61 | 53,095.75 Da | 47.27 | 78.37 | -0.50 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14134 | PKc_CLK | 91 | 364 | 7.55076E-158 | - |
| Pfam | PF00069 | Protein kinase domain | 104 | 298 | 6.1E-29 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 91 | 344 | 4.72E-51 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 183 | 298 | 1.5E-28 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 299 | 358 | 8.5E-7 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 81 | 182 | 2.4E-36 | - |
| SMART | SM00220 | serkin_6 | 104 | 361 | 1.1E-22 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 104 | 465 | 23.4674 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 225 | 237 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 436 | 465 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G53570.3 | FUS3-complementing gene 1. a member of a CDC2-related kinase subfamily, the LAMMER kinases. activates STE12-dependent functions in yeast. | 0 |
| RefSeq | XP_021655754.1 | serine/threonine-protein kinase AFC1 isoform X1 [Hevea brasiliensis] | 0 |
| P51566 | Serine/threonine-protein kinase AFC1 OS=Arabidopsis thaliana OX=3702 GN=AFC1 PE=2 SV=2 | 0 | |
| TrEMBL | A0A2P2LFD0 | Uncharacterized protein MANES_08G075400 OS=Rhizophora mucronata OX=61149 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology