Basic Information
Locus ID:
nbisL1-mrna-9905
Species & Taxonomic ID:
Rhizophora apiculata & 106626
Genome Assembly:
GCA_037832385.1
Description:
serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr11 | 3338117 | 3347671 | - | nbisL1-mrna-9905 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.07 | 94,795.96 Da | 40.83 | 68.78 | -0.73 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd13228 | PHear_NECAP | 14 | 134 | 2.35682E-71 | IPR012466 |
| CDD | cd05599 | STKc_NDR_like | 418 | 783 | 0.0 | - |
| Pfam | PF00433 | Protein kinase C terminal domain | 738 | 782 | 1.3E-4 | IPR017892 |
| Pfam | PF00069 | Protein kinase domain | 421 | 719 | 8.5E-64 | IPR000719 |
| Pfam | PF07933 | Protein of unknown function (DUF1681) | 13 | 175 | 2.1E-55 | IPR012466 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 393 | 771 | 6.2E-87 | IPR011009 |
| SUPERFAMILY | SSF50729 | PH domain-like | 10 | 138 | 3.57E-47 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 418 | 748 | 1.1E-107 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 504 | 737 | 1.1E-107 | - |
| Gene3D | G3DSA:2.30.29.30 | - | 16 | 139 | 9.9E-48 | IPR011993 |
| SMART | SM00133 | pkinase_C_6 | 720 | 784 | 4.4E-7 | IPR000961 |
| SMART | SM00220 | serkin_6 | 420 | 719 | 3.0E-104 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 420 | 719 | 47.226654 | IPR000719 |
| ProSiteProfiles | PS51285 | AGC-kinase C-terminal domain profile. | 720 | 792 | 14.433516 | IPR000961 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 426 | 449 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 539 | 551 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 797 | 814 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 797 | 838 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 318 | 337 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 318 | 338 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 815 | 838 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G03920.1 | Protein kinase family protein. | 0 |
| RefSeq | XP_029117207.1 | LOW QUALITY PROTEIN: serine/threonine-protein kinase tricorner [Elaeis guineensis] | 0 |
| Q681Q7 | Uncharacterized protein At1g03900 OS=Arabidopsis thaliana OX=3702 GN=At1g03900 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8N4I632 | LOW QUALITY PROTEIN: serine/threonine-protein kinase tricorner OS=Elaeis guineensis var. tenera OX=51953 GN=LOC105033607 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 2 | jg35429, jg8684 |
| Aizoaceae | Mesembryanthemum crystallinum | 1 | gene_13478 |
| Amaranthaceae | Atriplex hortensis | 1 | Ah000166 |
| Amaranthaceae | Beta vulgaris | 1 | BVRB_5g121280 |
| Amaranthaceae | Salicornia bigelovii | 2 | Sbi_jg31407, Sbi_jg57865 |
| Amaranthaceae | Salicornia europaea | 1 | Seu_jg25505 |
| Amaranthaceae | Suaeda aralocaspica | 1 | GOSA_00026703 |
| Amaranthaceae | Suaeda glauca | 2 | Sgl54442, Sgl59775 |
| Amaranthaceae | Chenopodium album | 3 | gene:ENSEOMG00000006617, gene:ENSEOMG00000023361 ... |
| Amaranthaceae | Chenopodium quinoa | 2 | CQ.Regalona.r1.5AG0026480, CQ.Regalona.r1.5BG0028010 |
| Anacardiaceae | Pistacia vera | 1 | pistato.v30016190 |
| Apiaceae | Apium graveolens | 1 | Ag2G01320 |
| Arecaceae | Cocos nucifera | 2 | COCNU_07G000760, COCNU_10G000620 |
| Arecaceae | Phoenix dactylifera | 2 | gene-LOC103703921, gene-LOC103717594 |
| Asparagaceae | Asparagus officinalis | 2 | AsparagusV1_04.108.V1.1, AsparagusV1_05.1862.V1.1 |
| Asteraceae | Flaveria trinervia | 3 | Ftri15G16431, Ftri9G03054, FtriNA16819 |
| Brassicaceae | Arabidopsis thaliana | 1 | AT1G03900.1 |
| Brassicaceae | Eutrema salsugineum | 1 | Thhalv10003361m.g.v1.0 |
| Brassicaceae | Schrenkiella parvula | 2 | Sp1g02750.v2.2, Sp2g08940.v2.2 |
| Brassicaceae | Brassica nigra | 2 | BniB03g000620.2N, BniB06g046850.2N |
| Casuarinaceae | Casuarina equisetifolia | 1 | Ceq06G1336 |
| Casuarinaceae | Casuarina glauca | 1 | Cgl06G1405 |
| Cymodoceaceae | Cymodocea nodosa | 1 | gene.Cymno10g00230 |
| Dunaliellaceae | Dunaliella salina | 1 | Dusal.0038s00018.v1.0 |
| Hydrocharitaceae | Thalassia testudinum | 1 | gene.Thate08g24650 |
| Malvaceae | Hibiscus hamabo Siebold & Zucc. | 1 | nbisL1-mrna-6363 |
| Nitrariaceae | Nitraria sibirica | 1 | evm.TU.LG04.1315 |
| Plantaginaceae | Plantago ovata | 1 | Pov_00002273 |
| Plumbaginaceae | Limonium bicolor | 1 | Lb2G10260 |
| Poaceae | Echinochloa crus-galli | 3 | AH01.1771, BH01.2093, CH01.2028 |
| Poaceae | Eleusine coracana subsp. coracana | 2 | gene-QOZ80_2AG0127810, gene-QOZ80_2BG0183270 |
| Poaceae | Hordeum vulgare | 1 | HORVU.MOREX.r3.1HG0042740.1 |
| Poaceae | Lolium multiflorum | 2 | gene-QYE76_017530, gene-QYE76_067658 |
| Poaceae | Oryza coarctata | 2 | Oco19G005970, Oco20G005880 |
| Poaceae | Oryza sativa | 1 | LOC_Os10g33630.1 |
| Poaceae | Paspalum vaginatum | 1 | gene-BS78_01G205900 |
| Poaceae | Sporobolus alterniflorus | 5 | Chr05G014450, Chr06G012950, Chr09G011040, Chr13G014180 ... |
| Poaceae | Thinopyrum elongatum | 1 | Tel1E01G283300 |
| Poaceae | Triticum dicoccoides | 2 | gene_TRIDC1AG023230, gene_TRIDC1BG028150 |
| Poaceae | Triticum aestivum | 3 | TraesCS1A02G153300.1, TraesCS1B02G171600.1 ... |
| Poaceae | Zea mays | 1 | Zm00001eb221890_P001 |
| Poaceae | Zoysia japonica | 2 | nbis-gene-19225, nbis-gene-21178 |
| Poaceae | Zoysia macrostachya | 2 | Zma_g13382, Zma_g16187 |
| Portulacaceae | Portulaca oleracea | 2 | evm.TU.LG02.1207, evm.TU.LG09.763 |
| Posidoniaceae | Posidonia oceanica | 2 | gene.Posoc02g16560, gene.Posoc06g00600 |
| Rhizophoraceae | Bruguiera sexangula | 2 | evm.TU.Scaffold_5_RagTag.1112, evm.TU.Scaffold_9_RagTag.1019 |
| Rhizophoraceae | Carallia pectinifolia | 1 | nbisL1-mrna-11584 |
| Rhizophoraceae | Ceriops tagal | 2 | nbisL1-mrna-5933, nbisL1-mrna-6155 |
| Rhizophoraceae | Ceriops zippeliana | 2 | nbisL1-mrna-10280, nbisL1-mrna-18293 |
| Rhizophoraceae | Kandelia candel | 2 | evm.TU.utg000003l.453, evm.TU.utg000006l.386 |
| Rhizophoraceae | Kandelia obovata | 2 | Maker00009914, Maker00013307 |
| Rhizophoraceae | Rhizophora apiculata | 2 | nbisL1-mrna-1439, nbisL1-mrna-9905 |
| Rhizophoraceae | Rhizophora mangle | 2 | nbisL1-mrna-19821, nbisL1-mrna-5032 |
| Salicaceae | Populus euphratica | 1 | populus_peu32877 |
| Solanaceae | Lycium barbarum | 2 | gene-LOC132605672, gene-LOC132610518 |
| Solanaceae | Solanum chilense | 2 | SOLCI002109100, SOLCI003771200 |
| Solanaceae | Solanum pennellii | 2 | gene-LOC107022051, gene-LOC107029255 |
| Tamaricaceae | Reaumuria soongarica | 1 | gene_16438 |
| Tamaricaceae | Tamarix chinensis | 1 | TC07G2698 |
| Zosteraceae | Zostera marina | 1 | Zosma01g38070.v3.1 |