HalophFGD

  • Home
  • Species
  • Search
  • Tools
    • Blast
    • GO enrichment
    • KEGG enrichment
    • Genome browser
    • Sequence extract
    • Network
    • Motif Enrichment
    • Motif Scan
    • Primer Design
  • Download
  • Manual
  • Contact
Basic Information
Locus ID: nbisL1-mrna-9902
Species & Taxonomic ID: Ceriops zippeliana & 413951
Genome Assembly: GCA_037897445.1
Description: Belongs to the protein kinase superfamily
Maps and Mapping Data
Chromosome Start End Strand ID
000011F_pilon 3489875 3490391 - nbisL1-mrna-9902
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
9.98 6,394.23 Da 55.43 75.69 -0.63
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
MobiDBLite mobidb-lite consensus disorder prediction 30 58 - -
KEGG Pathway
KO Term:
K04733 (interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1])
Pathway:
ko04010 (MAPK signaling pathway) map04010 (MAPK signaling pathway) map04064 (NF-kappa B signaling pathway) map04620 (Toll-like receptor signaling pathway) map04621 (NOD-like receptor signaling pathway) ko04624 (Toll and Imd signaling pathway) map04624 (Toll and Imd signaling pathway)
Best hit
Source Best Hit ID Description E-value
RefSeq XP_021659171.1 probable receptor-like serine/threonine-protein kinase At4g34500 [Hevea brasiliensis] 0
TrEMBL A0A067LG41 Protein kinase domain-containing protein OS=Jatropha curcas OX=180498 GN=JCGZ_10088 PE=3 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network

No network data available for this species.

Orthology
Family Species Count Orthologous Genes
Rhizophoraceae Carallia pectinifolia 1 nbisL1-mrna-4988
Rhizophoraceae Ceriops zippeliana 2 nbisL1-mrna-9902, nbisL1-mrna-9903
Rhizophoraceae Rhizophora mangle 1 nbisL1-mrna-1260
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.