halophFGD

Basic Information

Locus ID: nbisL1-mrna-9812

Species & Taxonomic ID: Hibiscus hamabo Siebold & Zucc. & 1841

Genome Assembly:

Description: heat shock protein

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
chr3	2432617	2437973	+	nbisL1-mrna-9812

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
6.00	67,972.57 Da	37.77	72.98	-0.59

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
CDD	cd16927	HATPase_Hsp90-like	104	286	3.85922E-69	-
Pfam	PF00183	Hsp90 protein	269	425	1.3E-49	IPR001404
Pfam	PF00183	Hsp90 protein	426	589	1.5E-45	IPR001404
SUPERFAMILY	SSF54211	Ribosomal protein S5 domain 2-like	342	426	1.74E-23	IPR020568
SUPERFAMILY	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase	95	296	4.82E-42	IPR036890
SUPERFAMILY	SSF110942	HSP90 C-terminal domain	444	564	5.75E-32	IPR037196
Gene3D	G3DSA:3.30.565.10	-	141	311	1.9E-49	IPR036890
Gene3D	G3DSA:3.30.565.10	-	91	128	1.4E-9	IPR036890
Gene3D	G3DSA:3.30.230.80	-	340	425	1.4E-28	-
Gene3D	G3DSA:1.20.120.790	-	426	568	1.1E-49	IPR037196
PIRSF	PIRSF002583	HSP90_HTPG	425	600	1.3E-29	IPR001404
PIRSF	PIRSF002583	HSP90_HTPG	145	427	3.4E-89	IPR001404
PIRSF	PIRSF002583	HSP90_HTPG	61	127	9.4E-14	IPR001404
ProSitePatterns	PS00298	Heat shock hsp90 proteins family signature.	115	124	-	IPR019805
PRINTS	PR00775	90kDa heat shock protein signature	116	138	1.5E-37	IPR020575
PRINTS	PR00775	90kDa heat shock protein signature	254	271	1.5E-37	IPR020575
PRINTS	PR00775	90kDa heat shock protein signature	272	290	1.5E-37	IPR020575
PRINTS	PR00775	90kDa heat shock protein signature	199	221	1.5E-37	IPR020575
PRINTS	PR00775	90kDa heat shock protein signature	95	115	1.5E-37	IPR020575
MobiDBLite	mobidb-lite	consensus disorder prediction	577	604	-	-

Gene Ontology

Biological Process:

GO:0006457 (protein folding)

Molecular Function:

GO:0005524 (ATP binding) GO:0016887 (ATP hydrolysis activity) GO:0051082 (unfolded protein binding)

KEGG Pathway

KO Term:

K09487 (heat shock protein 90kDa beta)

Pathway:

ko04141 (Protein processing in endoplasmic reticulum) map04141 (Protein processing in endoplasmic reticulum) ko04151 (PI3K-Akt signaling pathway) map04151 (PI3K-Akt signaling pathway) ko04626 (Plant-pathogen interaction) map04626 (Plant-pathogen interaction) map04657 (IL-17 signaling pathway)

Best hit

Source	Best Hit ID	Description
TAIR	AT3G07770.1	HEAT SHOCK PROTEIN 89.1.
RefSeq	XP_039004118.1	heat shock protein 90-6, mitochondrial-like [Hibiscus syriacus]
Swiss-Prot	F4JFN3	Heat shock protein 90-6, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=HSP90-6 PE=1 SV=1
TrEMBL	A0A6A3AH85	Heat shock protein 89.1 isoform 2 OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00110462pilonHSYRG00365 PE=3 SV=1

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

🔍 Protein-Protein Interaction Network

Orthology

Family	Species	Count	Orthologous Genes
Acanthaceae	Avicennia marina	15	jg11762, jg13948, jg1764, jg2256, jg22977, jg24632, jg29177 ... jg33959, jg34868, jg37076, jg37077, jg37432, jg38449, jg39366, jg9229
Aizoaceae	Mesembryanthemum crystallinum	6	gene_16160, gene_1802, gene_18337, gene_25568, gene_7128 ... gene_8744
Amaranthaceae	Atriplex hortensis	7	Ah004563, Ah009095, Ah018810, Ah020432, Ah026311, Ah036219 ... Ah038132
Amaranthaceae	Beta vulgaris	4	BVRB_3g053350, BVRB_4g090710, BVRB_6g140130, BVRB_7g165250
Amaranthaceae	Salicornia bigelovii	10	Sbi_jg13948, Sbi_jg18547, Sbi_jg36946, Sbi_jg38455 ... Sbi_jg40035, Sbi_jg51158, Sbi_jg51992, Sbi_jg55362, Sbi_jg60283, Sbi_jg6565
Amaranthaceae	Salicornia europaea	5	Seu_jg14299, Seu_jg15357, Seu_jg24446, Seu_jg4817 ... Seu_jg9867
Amaranthaceae	Suaeda aralocaspica	7	GOSA_00006456, GOSA_00011126, GOSA_00011128, GOSA_00014049 ... GOSA_00015789, GOSA_00017308, GOSA_00023611
Amaranthaceae	Suaeda glauca	12	Sgl01889, Sgl07067, Sgl12193, Sgl17565, Sgl23587, Sgl28785 ... Sgl34988, Sgl40362, Sgl44010, Sgl48779, Sgl78361, Sgl80865
Amaranthaceae	Chenopodium album	17	gene:ENSEOMG00000001252, gene:ENSEOMG00000001598 ... gene:ENSEOMG00000002572, gene:ENSEOMG00000004840, gene:ENSEOMG00000011550, gene:ENSEOMG00000018416, gene:ENSEOMG00000018830, gene:ENSEOMG00000022890, gene:ENSEOMG00000025525, gene:ENSEOMG00000026036, gene:ENSEOMG00000030154, gene:ENSEOMG00000031767, gene:ENSEOMG00000034888, gene:ENSEOMG00000040180, gene:ENSEOMG00000044412, gene:ENSEOMG00000048380, gene:ENSEOMG00000050215
Amaranthaceae	Chenopodium quinoa	12	CQ.Regalona.r1.1AG0021200, CQ.Regalona.r1.1BG0003310 ... CQ.Regalona.r1.2AG0012260, CQ.Regalona.r1.2BG0000690, CQ.Regalona.r1.3AG0003640, CQ.Regalona.r1.3BG0003750, CQ.Regalona.r1.4BG0026220, CQ.Regalona.r1.5BG0007130, CQ.Regalona.r1.6AG0016350, CQ.Regalona.r1.6BG0017540, CQ.Regalona.r1.9AG0003120, CQ.Regalona.r1.9BG0019380
Anacardiaceae	Pistacia vera	8	pistato.v30017310, pistato.v30049260, pistato.v30135500 ... pistato.v30136430, pistato.v30151810, pistato.v30152190, pistato.v30183570, pistato.v30226320
Apiaceae	Apium graveolens	11	Ag10G02585, Ag11G03243, Ag11G03560, Ag1G01523, Ag2G01719 ... Ag2G02046, Ag3G00501, Ag3G00783, Ag3G02531, Ag5G01998, AgUnG00358
Arecaceae	Cocos nucifera	13	COCNU_01G012790, COCNU_01G014030, COCNU_05G003680 ... COCNU_08G007290, COCNU_08G008630, COCNU_09G002360, COCNU_09G002610, COCNU_11G005660, COCNU_11G006630, COCNU_11G006660, COCNU_13G008270, COCNU_16G004140, scaffold044891G000040
Arecaceae	Phoenix dactylifera	9	gene-LOC103696345, gene-LOC103706592, gene-LOC103714924 ... gene-LOC103715800, gene-LOC103719511, gene-LOC103720615, gene-LOC103722381, gene-LOC103722384, gene-LOC120105353
Asparagaceae	Asparagus officinalis	7	AsparagusV1_01.493.V1.1, AsparagusV1_04.803.V1.1 ... AsparagusV1_05.1294.V1.1, AsparagusV1_05.2114.V1.1, AsparagusV1_07.2953.V1.1, AsparagusV1_08.276.V1.1, AsparagusV1_10.1651.V1.1
Asteraceae	Flaveria trinervia	11	Ftri11G21458, Ftri14G05865, Ftri14G29833, Ftri17G01479 ... Ftri5G05431, Ftri7G13760, Ftri7G16584, Ftri7G17780, Ftri7G21108, Ftri8G23680, Ftri9G30306
Brassicaceae	Arabidopsis thaliana	7	AT2G04030.1, AT3G07770.1, AT4G24190.1, AT5G52640.1 ... AT5G56000.1, AT5G56010.1, AT5G56030.2
Brassicaceae	Eutrema salsugineum	8	Thhalv10002229m.g.v1.0, Thhalv10003676m.g.v1.0 ... Thhalv10012817m.g.v1.0, Thhalv10012832m.g.v1.0, Thhalv10020096m.g.v1.0, Thhalv10024414m.g.v1.0, Thhalv10024561m.g.v1.0, Thhalv10024564m.g.v1.0
Brassicaceae	Schrenkiella parvula	7	Sp1g26840.v2.2, Sp2g14740.v2.2, Sp3g06700.v2.2 ... Sp6g14810.v2.2, Sp6g17850.v2.2, Sp7g22160.v2.2, Sp7g24520.v2.2
Brassicaceae	Brassica nigra	15	BniB01g056190.2N, BniB02g030340.2N, BniB02g066180.2N ... BniB02g081020.2N, BniB03g013170.2N, BniB03g023840.2N, BniB04g048430.2N, BniB05g013020.2N, BniB05g035660.2N, BniB05g035710.2N, BniB07g058900.2N, BniB08g004540.2N, BniB08g014570.2N, BniB08g014830.2N, BniB08g014860.2N
Casuarinaceae	Casuarina equisetifolia	6	Ceq01G1522, Ceq02G2285, Ceq03G0296, Ceq03G0870, Ceq07G0470 ... Ceq09G1485
Casuarinaceae	Casuarina glauca	7	Cgl01G1687, Cgl02G2375, Cgl03G0341, Cgl03G0378, Cgl03G0949 ... Cgl07G0493, Cgl09G1576
Cymodoceaceae	Cymodocea nodosa	5	gene.Cymno01g05070, gene.Cymno02g06210, gene.Cymno02g11350 ... gene.Cymno06g09390, gene.Cymno06g11320
Dunaliellaceae	Dunaliella salina	4	Dusal.0035s00018.v1.0, Dusal.0354s00001.v1.0 ... Dusal.0402s00003.v1.0, Dusal.0433s00005.v1.0
Hydrocharitaceae	Thalassia testudinum	8	gene.Thate02g38610, gene.Thate03g25340, gene.Thate04g08930 ... gene.Thate08g05960, gene.Thate08g05970, gene.Thate09g11880, gene.Thate09g16960, gene.Thate09g18100
Malvaceae	Hibiscus hamabo Siebold & Zucc.	6	nbisL1-mrna-11777, nbisL1-mrna-1367, nbisL1-mrna-1624 ... nbisL1-mrna-2506, nbisL1-mrna-9018, nbisL1-mrna-9812
Nitrariaceae	Nitraria sibirica	6	evm.TU.LG01.2784, evm.TU.LG03.440, evm.TU.LG04.2225 ... evm.TU.LG05.2077, evm.TU.LG06.194, evm.TU.LG10.1447
Plantaginaceae	Plantago ovata	9	Pov_00001484, Pov_00002565, Pov_00021935, Pov_00027343 ... Pov_00031797, Pov_00037966, Pov_00038429, Pov_00041023, Pov_00041101
Plumbaginaceae	Limonium bicolor	9	Lb1G03925, Lb1G03926, Lb1G03927, Lb2G11854, Lb2G11859 ... Lb3G21417, Lb4G25547, Lb5G29127, Lb7G35203
Poaceae	Echinochloa crus-galli	29	AH03.2279, AH03.2366, AH03.2849, AH05.3606, AH06.1301 ... AH06.1302, AH06.2992, AH08.1889, AH08.1964, AH08.1966, AH08.1967, AH09.58, BH03.2114, BH03.2493, BH05.3629, BH06.2770, BH08.1978, BH08.2065, BH08.2066, BH08.539, BH09.128, CH03.2604, CH03.2687, CH05.3800, CH06.3122, CH08.2164, CH08.2242, CH09.116, Contig2201.2
Poaceae	Eleusine coracana subsp. coracana	18	gene-QOZ80_1AG0029710, gene-QOZ80_1BG0079770 ... gene-QOZ80_4AG0327880, gene-QOZ80_4BG0360010, gene-QOZ80_5AG0392300, gene-QOZ80_5BG0438960, gene-QOZ80_6AG0538530, gene-QOZ80_6AG0539300, gene-QOZ80_6AG0546770, gene-QOZ80_6AG0550970, gene-QOZ80_6BG0491790, gene-QOZ80_6BG0492690, gene-QOZ80_6BG0500190, gene-QOZ80_6BG0504540, gene-QOZ80_8AG0635220, gene-QOZ80_8AG0636130, gene-QOZ80_8BG0664120, gene-QOZ80_8BG0664820
Poaceae	Hordeum vulgare	6	HORVU.MOREX.r3.2HG0099870.1, HORVU.MOREX.r3.5HG0447870.1 ... HORVU.MOREX.r3.5HG0488480.2, HORVU.MOREX.r3.5HG0490180.1, HORVU.MOREX.r3.7HG0678460.1, HORVU.MOREX.r3.7HG0746770.1
Poaceae	Lolium multiflorum	9	gene-QYE76_002100, gene-QYE76_005932, gene-QYE76_006015 ... gene-QYE76_006106, gene-QYE76_029861, gene-QYE76_030984, gene-QYE76_036799, gene-QYE76_038011, gene-QYE76_038012
Poaceae	Oryza coarctata	13	Oco11G017350, Oco12G017560, Oco15G011590, Oco15G012130 ... Oco16G010450, Oco16G010980, Oco17G007280, Oco17G007610, Oco17G007630, Oco18G007520, Oco18G007890, Oco23G007450, Oco24G007020
Poaceae	Oryza sativa	8	LOC_Os04g01740.1, LOC_Os06g50300.1, LOC_Os08g38086.3 ... LOC_Os08g39140.1, LOC_Os09g29840.1, LOC_Os09g30412.1, LOC_Os09g30418.1, LOC_Os12g32986.1
Poaceae	Paspalum vaginatum	12	gene-BS78_01G341100, gene-BS78_01G341200, gene-BS78_K167500 ... gene-BS78_02G214200, gene-BS78_07G172900, gene-BS78_07G179800, gene-BS78_07G179900, gene-BS78_08G082900, gene-BS78_10G279500, gene-BS78_K221400, gene-BS78_K295900, gene-BS78_K296000
Poaceae	Puccinellia tenuiflora	9	Pt_Chr0306032, Pt_Chr0306860, Pt_Chr0401721, Pt_Chr0404036 ... Pt_Chr0405922, Pt_Chr0501117, Pt_Chr0701621, Pt_Chr0701726, Pt_Chr0701757
Poaceae	Sporobolus alterniflorus	25	Chr02G033580, Chr04G015980, Chr05G000460, Chr06G016740 ... Chr0G004280, Chr0G015360, Chr0G015810, Chr0G015830, Chr10G007560, Chr10G007570, Chr10G022220, Chr11G000300, Chr14G015720, Chr14G016050, Chr14G016060, Chr16G016320, Chr17G015670, Chr17G016040, Chr19G010030, Chr20G000750, Chr21G014770, Chr21G015080, Chr21G015090, Chr27G006390, Chr29G002820
Poaceae	Thinopyrum elongatum	13	Tel2E01G091100, Tel3E01G329200, Tel5E01G188100 ... Tel5E01G402200, Tel5E01G416800, Tel6E01G635900, Tel7E01G406600, Tel7E01G428300, Tel7E01G922600, Tel7E01G922700, Tel7E01G923500, Tel7E01G923700, Tel7E01G931700
Poaceae	Triticum dicoccoides	12	gene_TRIDC2AG003590, gene_TRIDC2AG029450 ... gene_TRIDC2BG004160, gene_TRIDC5AG015710, gene_TRIDC5AG019020, gene_TRIDC5AG039220, gene_TRIDC5BG017740, gene_TRIDC5BG041580, gene_TRIDC5BG042990, gene_TRIDC7AG030920, gene_TRIDC7AG074030, gene_TRIDC7BG023680
Poaceae	Triticum aestivum	23	TraesCS1A02G131700.1, TraesCS1A02G154800.1 ... TraesCS2A02G033700.1, TraesCS2B02G047400.1, TraesCS2D02G033200.2, TraesCS3A02G119400.1, TraesCS3A02G155700.1, TraesCS5A02G101900.2, TraesCS5A02G251000.1, TraesCS5A02G260600.3, TraesCS5B02G106300.1, TraesCS5B02G249000.2, TraesCS5B02G258900.2, TraesCS5D02G113700.1, TraesCS5D02G258900.2, TraesCS5D02G268000.1, TraesCS6D02G046900.1, TraesCS7A02G242200.1, TraesCS7A02G529900.1, TraesCS7B02G149200.1, TraesCS7B02G446900.3, TraesCS7D02G241100.1, TraesCS7D02G517800.1
Poaceae	Zea mays	11	Zm00001eb034130_P001, Zm00001eb101750_P001 ... Zm00001eb137900_P001, Zm00001eb199230_P001, Zm00001eb199590_P002, Zm00001eb228120_P002, Zm00001eb264470_P003, Zm00001eb272290_P001, Zm00001eb315880_P001, Zm00001eb316410_P001, Zm00001eb418610_P001
Poaceae	Zoysia japonica	13	nbis-gene-17366, nbis-gene-30204, nbis-gene-30532 ... nbis-gene-40784, nbis-gene-42997, nbis-gene-45760, nbis-gene-46819, nbis-gene-47592, nbis-gene-47633, nbis-gene-48666, nbis-gene-55710, nbis-gene-57728, nbis-gene-9555
Poaceae	Zoysia macrostachya	10	Zma_g18963, Zma_g19230, Zma_g23174, Zma_g23197, Zma_g24320 ... Zma_g25125, Zma_g25897, Zma_g30496, Zma_g31150, Zma_g33417
Portulacaceae	Portulaca oleracea	17	evm.TU.LG01.1437, evm.TU.LG02.611, evm.TU.LG02.612 ... evm.TU.LG03.156, evm.TU.LG04.1374, evm.TU.LG05.1897, evm.TU.LG06.1902, evm.TU.LG09.2067, evm.TU.LG09.2068, evm.TU.LG10.495, evm.TU.LG12.1564, evm.TU.LG12.1660, evm.TU.LG13.534, evm.TU.LG13.613, evm.TU.LG14.719, evm.TU.LG17.498, evm.TU.LG21.235
Posidoniaceae	Posidonia oceanica	6	gene.Posoc02g10220, gene.Posoc02g21940, gene.Posoc03g05660 ... gene.Posoc03g09600, gene.Posoc07g06780, gene.Posoc08g01990
Rhizophoraceae	Bruguiera sexangula	9	evm.TU.Scaffold_10_RagTag.1311, evm.TU.Scaffold_4_RagTag.86 ... evm.TU.Scaffold_11_RagTag.1435, evm.TU.Scaffold_15_RagTag.487, evm.TU.Scaffold_16_RagTag.146, evm.TU.Scaffold_7_RagTag.46, evm.TU.Scaffold_8_RagTag.1172, evm.TU.Scaffold_8_RagTag.1669, evm.TU.Scaffold_9_RagTag.1436
Rhizophoraceae	Carallia pectinifolia	12	nbisL1-mrna-1082, nbisL1-mrna-12729, nbisL1-mrna-19709 ... nbisL1-mrna-20578, nbisL1-mrna-20592, nbisL1-mrna-22388, nbisL1-mrna-26663, nbisL1-mrna-29253, nbisL1-mrna-31879, nbisL1-mrna-31887, nbisL1-mrna-8556, nbisL1-mrna-8627
Rhizophoraceae	Ceriops tagal	5	nbisL1-mrna-10282, nbisL1-mrna-11566, nbisL1-mrna-13583 ... nbisL1-mrna-17411, nbisL1-mrna-5513
Rhizophoraceae	Ceriops zippeliana	7	nbisL1-mrna-15034, nbisL1-mrna-15857, nbisL1-mrna-20728 ... nbisL1-mrna-21430, nbisL1-mrna-2192, nbisL1-mrna-22357, nbisL1-mrna-22445
Rhizophoraceae	Kandelia candel	8	add.evm.TU.utg000022l.228, evm.TU.utg000001l.248 ... evm.TU.utg000003l.898, evm.TU.utg000008l.52, evm.TU.utg000010l.402, evm.TU.utg000018l.19, evm.TU.utg000018l.380, evm.TU.utg000028l.24
Rhizophoraceae	Kandelia obovata	7	Maker00000890, Maker00002402, Maker00002814, Maker00002895 ... Maker00008508, Maker00009171, Maker00010696
Rhizophoraceae	Rhizophora apiculata	7	nbisL1-mrna-1110, nbisL1-mrna-13380, nbisL1-mrna-13856 ... nbisL1-mrna-13890, nbisL1-mrna-2331, nbisL1-mrna-7982, nbisL1-mrna-9361
Rhizophoraceae	Rhizophora mangle	7	nbisL1-mrna-11086, nbisL1-mrna-20551, nbisL1-mrna-22569 ... nbisL1-mrna-23739, nbisL1-mrna-2531, nbisL1-mrna-4642, nbisL1-mrna-6310
Salicaceae	Populus euphratica	18	populus_peu00063, populus_peu00064, populus_peu01676 ... populus_peu06985, populus_peu09800, populus_peu09801, populus_peu09802, populus_peu10481, populus_peu10482, populus_peu15366, populus_peu24659, populus_peu24660, populus_peu24674, populus_peu26551, populus_peu26908, populus_peu26917, populus_peu34448, populus_peu34449
Solanaceae	Lycium barbarum	8	gene-LOC132616876, gene-LOC132617350, gene-LOC132627770 ... gene-LOC132628130, gene-LOC132631974, gene-LOC132636281, gene-LOC132639412, gene-LOC132641911
Solanaceae	Solanum chilense	7	SOLCI000499200, SOLCI000770900, SOLCI000892600 ... SOLCI001998600, SOLCI003620400, SOLCI004524200, SOLCI007306100
Solanaceae	Solanum pennellii	7	gene-LOC107007081, gene-LOC107012688, gene-LOC107017685 ... gene-LOC107020312, gene-LOC107023349, gene-LOC107025633, gene-LOC107026217
Tamaricaceae	Reaumuria soongarica	9	STRG.18728_chr07_-, STRG.18730_chr07_-, STRG.22405_chr10_- ... STRG.31281_chr11_-, STRG.31819_chr09_-, STRG.7483_chr04_-, gene_147, gene_4174, gene_9914
Tamaricaceae	Tamarix chinensis	6	TC03G0176, TC03G0891, TC04G2883, TC05G2564, TC06G0548 ... TC06G2329
Zosteraceae	Zostera marina	4	Zosma01g03830.v3.1, Zosma01g27280.v3.1, Zosma03g35240.v3.1 ... Zosma06g17720.v3.1