Basic Information
Locus ID:
nbisL1-mrna-9800
Species & Taxonomic ID:
Carallia pectinifolia & 98586
Genome Assembly:
GCA_037832335.1
Description:
1-phosphatidylinositol-3-phosphate 5-kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr04 | 17151560 | 17164975 | - | nbisL1-mrna-9800 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.38 | 183,927.55 Da | 39.69 | 79.38 | -0.38 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd17300 | PIPKc_PIKfyve | 1304 | 1564 | 5.11906E-143 | IPR044769 |
| CDD | cd03334 | Fab1_TCP | 208 | 471 | 1.43037E-102 | - |
| Pfam | PF01504 | Phosphatidylinositol-4-phosphate 5-Kinase | 1511 | 1562 | 7.3E-8 | IPR002498 |
| Pfam | PF01504 | Phosphatidylinositol-4-phosphate 5-Kinase | 1342 | 1508 | 1.0E-34 | IPR002498 |
| Pfam | PF00118 | TCP-1/cpn60 chaperonin family | 212 | 467 | 2.6E-28 | IPR002423 |
| SUPERFAMILY | SSF56104 | SAICAR synthase-like | 1302 | 1564 | 4.45E-79 | - |
| SUPERFAMILY | SSF52029 | GroEL apical domain-like | 271 | 439 | 1.02E-31 | IPR027409 |
| Gene3D | G3DSA:3.30.800.10 | Phosphatidylinositol Phosphate Kinase II Beta | 1287 | 1423 | 2.3E-36 | IPR027484 |
| Gene3D | G3DSA:3.30.810.10 | - | 1426 | 1565 | 6.4E-41 | - |
| Gene3D | G3DSA:3.50.7.10 | GroEL | 270 | 439 | 9.8E-40 | IPR027409 |
| SMART | SM00330 | PIPK_2 | 1276 | 1565 | 1.2E-90 | IPR002498 |
| ProSiteProfiles | PS51455 | Phosphatidylinositol phosphate kinase (PIPK) domain profile. | 1240 | 1564 | 57.289291 | IPR002498 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1096 | 1118 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 105 | 124 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 138 | 164 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 105 | 191 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G34260.1 | FORMS APLOID AND BINUCLEATE CELLS 1A. Encodes a protein that is predicted to act as a phosphatidylinositol-3P 5-kinase, but, because it lacks a FYVE domain, it is unlikely to be efficiently targeted to membranes containing the porposed phosphatidylinositol-3P substrate. Therefore, its molecular function remains unknown. | 0 |
| RefSeq | XP_021667231.1 | putative 1-phosphatidylinositol-3-phosphate 5-kinase FAB1D isoform X1 [Hevea brasiliensis] | 0 |
| Q9XID0 | Putative 1-phosphatidylinositol-3-phosphate 5-kinase FAB1D OS=Arabidopsis thaliana OX=3702 GN=FAB1D PE=3 SV=1 | 0 | |
| TrEMBL | A0A2P2ME17 | 1-phosphatidylinositol-3-phosphate 5-kinase OS=Rhizophora mucronata OX=61149 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology