Basic Information
Locus ID:
nbisL1-mrna-9751
Species & Taxonomic ID:
Hibiscus hamabo Siebold & Zucc. & 1841
Description:
transcriptional corepressor
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3 | 2015327 | 2019317 | + | nbisL1-mrna-9751 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.39 | 16,505.50 Da | 31.60 | 66.71 | -0.18 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00400 | WD domain, G-beta repeat | 109 | 142 | 0.0075 | IPR001680 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 19 | 145 | 5.86E-21 | IPR036322 |
| Gene3D | G3DSA:2.130.10.10 | - | 11 | 146 | 5.8E-20 | IPR015943 |
| SMART | SM00320 | WD40_4 | 20 | 60 | 0.041 | IPR001680 |
| SMART | SM00320 | WD40_4 | 63 | 99 | 110.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 104 | 142 | 0.0072 | IPR001680 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G32551.1 | LisH dimerisation motif;WD40/YVTN repeat-like-containing domain. LEUNIG regulates floral organ identity,gynoecium and ovule development. Negatively regulates AGAMOUS . Encodes a glutamine-rich protein with seven WD repeats similar to transcriptional corepressors. | 0 |
| RefSeq | XP_052489522.1 | transcriptional corepressor LEUNIG_HOMOLOG isoform X2 [Gossypium raimondii] | 0 |
| Q9FUY2 | Transcriptional corepressor LEUNIG OS=Arabidopsis thaliana OX=3702 GN=LUG PE=1 SV=2 | 0 | |
| TrEMBL | A0A7J8TQU1 | Transcriptional corepressor LEUNIG OS=Gossypium klotzschianum OX=34286 GN=Goklo_023520 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology