Basic Information
Locus ID:
nbisL1-mrna-9663
Species & Taxonomic ID:
Ceriops zippeliana & 413951
Genome Assembly:
GCA_037897445.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 000011F_pilon | 2177635 | 2184452 | + | nbisL1-mrna-9663 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.50 | 103,249.83 Da | 40.73 | 90.19 | -0.17 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 629 | 777 | 1.5E-35 | IPR001245 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 34 | 72 | 1.5E-10 | IPR013210 |
| SUPERFAMILY | SSF52058 | L domain-like | 48 | 390 | 1.87E-52 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 614 | 873 | 9.57E-58 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 198 | 297 | 1.6E-23 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 704 | 802 | 1.8E-24 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 803 | 871 | 3.7E-7 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 298 | 379 | 3.0E-11 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 599 | 703 | 3.0E-34 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 33 | 197 | 1.5E-42 | IPR032675 |
| SMART | SM00220 | serkin_6 | 628 | 859 | 5.2E-14 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 628 | 895 | 27.128105 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 634 | 656 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 748 | 760 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 866 | 927 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 863 | 933 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G01950.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_021684347.1 | probable LRR receptor-like serine/threonine-protein kinase At1g06840 isoform X1 [Hevea brasiliensis] | 0 |
| C0LGD7 | Probable LRR receptor-like serine/threonine-protein kinase At1g06840 OS=Arabidopsis thaliana OX=3702 GN=At1g06840 PE=1 SV=2 | 0 | |
| TrEMBL | B9T0N7 | ATP binding protein, putative OS=Ricinus communis OX=3988 GN=RCOM_0126270 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology