Basic Information
Locus ID:
nbisL1-mrna-9652
Species & Taxonomic ID:
Hibiscus hamabo Siebold & Zucc. & 1841
Description:
belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3 | 1366438 | 1367977 | - | nbisL1-mrna-9652 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.14 | 41,677.52 Da | 46.78 | 88.87 | -0.23 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 114 | 366 | 1.7E-29 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 94 | 366 | 5.68E-59 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 190 | 372 | 1.6E-42 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 74 | 186 | 1.9E-23 | - |
| SMART | SM00220 | serkin_6 | 113 | 346 | 5.2E-13 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 113 | 372 | 24.965603 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 119 | 141 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 232 | 244 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G35960.2 | - | 0 |
| RefSeq | XP_039036769.1 | receptor-like cytosolic serine/threonine-protein kinase RBK2 [Hibiscus syriacus] | 0 |
| Q8RXC8 | Receptor-like cytosolic serine/threonine-protein kinase RBK2 OS=Arabidopsis thaliana OX=3702 GN=RBK2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A6A2YAE8 | Receptor-like cytosolic serine/threonine-protein kinase RBK2 OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00111983pilonHSYRG00175 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology