Basic Information
Locus ID:
nbisL1-mrna-9650
Species & Taxonomic ID:
Hibiscus hamabo Siebold & Zucc. & 1841
Description:
LRR receptor-like serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3 | 1355891 | 1357069 | - | nbisL1-mrna-9650 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.76 | 42,760.12 Da | 43.37 | 104.95 | 0.11 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 28 | 66 | 1.5E-9 | IPR013210 |
| Pfam | PF13516 | Leucine Rich repeat | 215 | 228 | 1.4 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 122 | 181 | 4.0E-7 | IPR001611 |
| SUPERFAMILY | SSF52058 | L domain-like | 37 | 365 | 1.47E-41 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 28 | 190 | 2.1E-37 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 191 | 365 | 8.3E-28 | IPR032675 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G03440.1 | Leucine-rich repeat (LRR) family protein. | 0 |
| RefSeq | XP_039003871.1 | LRR receptor-like serine/threonine-protein kinase SIK1 [Hibiscus syriacus] | 0 |
| TrEMBL | A0A6A3AAD1 | Transducin family protein / WD-40 repeat family protein isoform 1 OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00110548pilonHSYRG01015 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology