Basic Information
Locus ID:
nbisL1-mrna-9647
Species & Taxonomic ID:
Carallia pectinifolia & 98586
Genome Assembly:
GCA_037832335.1
Description:
receptor-like serine threonine-protein kinase At5g57670
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr04 | 15805174 | 15809305 | + | nbisL1-mrna-9647 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.43 | 78,361.43 Da | 39.40 | 88.91 | -0.32 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00293 | USP_Like | 19 | 152 | 1.62172E-9 | - |
| Pfam | PF00582 | Universal stress protein family | 20 | 145 | 1.6E-8 | IPR006016 |
| Pfam | PF00069 | Protein kinase domain | 406 | 563 | 2.0E-29 | IPR000719 |
| SUPERFAMILY | SSF52402 | Adenine nucleotide alpha hydrolases-like | 20 | 152 | 2.37E-5 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 385 | 639 | 2.46E-52 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 371 | 478 | 2.1E-29 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 573 | 657 | 1.1E-7 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 479 | 572 | 7.4E-22 | - |
| Gene3D | G3DSA:3.40.50.620 | HUPs | 19 | 155 | 1.8E-7 | IPR014729 |
| SMART | SM00220 | serkin_6 | 404 | 639 | 1.6E-10 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 404 | 703 | 24.061028 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 525 | 537 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 410 | 432 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G77280.1 | Protein kinase protein with adenine nucleotide alpha hydrolases-like domain. | 0 |
| RefSeq | XP_021636604.1 | probable receptor-like serine/threonine-protein kinase At5g57670 isoform X3 [Hevea brasiliensis] | 0 |
| B5X4Z9 | Protein kinase STUNTED OS=Arabidopsis thaliana OX=3702 GN=STU PE=2 SV=1 | 0 | |
| TrEMBL | A0A2P2L387 | Uncharacterized protein MANES_02G168800 OS=Rhizophora mucronata OX=61149 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology