Basic Information
Locus ID:
nbisL1-mrna-9646
Species & Taxonomic ID:
Hibiscus hamabo Siebold & Zucc. & 1841
Description:
Belongs to the monovalent cation proton antiporter 1 (CPA1) transporter (TC 2.A.36) family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3 | 1327072 | 1333756 | + | nbisL1-mrna-9646 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.37 | 53,208.80 Da | 38.93 | 111.59 | 0.57 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00999 | Sodium/hydrogen exchanger family | 19 | 345 | 1.1E-41 | IPR006153 |
| Gene3D | G3DSA:6.10.140.1330 | - | 133 | 184 | 9.8E-16 | - |
| PRINTS | PR01084 | Na+/H+ exchanger signature | 85 | 99 | 2.1E-11 | IPR004709 |
| PRINTS | PR01084 | Na+/H+ exchanger signature | 100 | 108 | 2.1E-11 | IPR004709 |
| PRINTS | PR01084 | Na+/H+ exchanger signature | 140 | 150 | 2.1E-11 | IPR004709 |
| PRINTS | PR01084 | Na+/H+ exchanger signature | 71 | 82 | 2.1E-11 | IPR004709 |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G05030.1 | sodium hydrogen exchanger 2. member of Sodium proton exchanger family | 0 |
| RefSeq | XP_039043016.1 | sodium/hydrogen exchanger 2-like isoform X2 [Hibiscus syriacus] | 0 |
| Q9SXJ8 | Sodium/hydrogen exchanger 1 OS=Oryza sativa subsp. japonica OX=39947 GN=NHX1 PE=2 SV=1 | 0 | |
| TrEMBL | A0A6A2XTY0 | Sodium/hydrogen exchanger 2 OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00112614pilonHSYRG00085 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology