Basic Information
Locus ID:
nbisL1-mrna-9579
Species & Taxonomic ID:
Ceriops zippeliana & 413951
Genome Assembly:
GCA_037897445.1
Short Name:
CPK13
Description:
Calcium-dependent protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 000011F_pilon | 1708666 | 1713406 | - | nbisL1-mrna-9579 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.29 | 55,854.93 Da | 38.78 | 87.42 | -0.33 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd05117 | STKc_CAMK | 52 | 323 | 2.48393E-123 | - |
| Pfam | PF13499 | EF-hand domain pair | 331 | 391 | 1.7E-10 | IPR002048 |
| Pfam | PF13499 | EF-hand domain pair | 403 | 466 | 2.2E-14 | IPR002048 |
| Pfam | PF00069 | Protein kinase domain | 55 | 322 | 2.3E-68 | IPR000719 |
| SUPERFAMILY | SSF47473 | EF-hand | 321 | 479 | 4.39E-44 | IPR011992 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 51 | 323 | 4.45E-76 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 139 | 327 | 1.4E-53 | - |
| Gene3D | G3DSA:1.10.238.10 | - | 328 | 396 | 1.5E-19 | - |
| Gene3D | G3DSA:1.10.238.10 | - | 397 | 499 | 1.6E-21 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 54 | 138 | 2.9E-24 | - |
| SMART | SM00220 | serkin_6 | 53 | 325 | 9.0E-87 | IPR000719 |
| SMART | SM00054 | efh_1 | 440 | 468 | 2.2E-6 | IPR002048 |
| SMART | SM00054 | efh_1 | 404 | 432 | 1.4E-4 | IPR002048 |
| SMART | SM00054 | efh_1 | 368 | 396 | 0.12 | IPR002048 |
| SMART | SM00054 | efh_1 | 332 | 360 | 2.0E-5 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 364 | 399 | 9.018011 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 328 | 363 | 15.908175 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 400 | 435 | 14.290241 | IPR002048 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 53 | 325 | 43.919296 | IPR000719 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 436 | 471 | 14.178661 | IPR002048 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 413 | 425 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 449 | 461 | - | IPR018247 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 173 | 185 | - | IPR008271 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 341 | 353 | - | IPR018247 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 59 | 82 | - | IPR017441 |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G51850.1 | calcium-dependent protein kinase 13. member of Calcium Dependent Protein Kinase | 0 |
| RefSeq | XP_021620700.1 | calcium-dependent protein kinase 13 [Manihot esculenta] | 0 |
| Q8W4I7 | Calcium-dependent protein kinase 13 OS=Arabidopsis thaliana OX=3702 GN=CPK13 PE=1 SV=2 | 0 | |
| TrEMBL | A0A2P2LMZ4 | Calcium-dependent protein kinase 13 OS=Rhizophora mucronata OX=61149 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology