Basic Information
Locus ID:
nbisL1-mrna-9521
Species & Taxonomic ID:
Hibiscus hamabo Siebold & Zucc. & 1841
Description:
BTB POZ domain-containing protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3 | 386089 | 389437 | + | nbisL1-mrna-9521 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.22 | 62,563.24 Da | 53.27 | 76.92 | -0.31 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd18186 | BTB_POZ_ZBTB_KLHL-like | 141 | 223 | 6.00924E-16 | - |
| Pfam | PF00651 | BTB/POZ domain | 139 | 237 | 1.2E-14 | IPR000210 |
| Pfam | PF07707 | BTB And C-terminal Kelch | 263 | 356 | 1.6E-9 | IPR011705 |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 439 | 550 | 9.15E-7 | - |
| SUPERFAMILY | SSF54695 | POZ domain | 136 | 237 | 4.16E-14 | IPR011333 |
| Gene3D | G3DSA:1.25.40.420 | - | 272 | 378 | 3.4E-13 | - |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 132 | 257 | 8.4E-19 | IPR011333 |
| SMART | SM00225 | BTB_4 | 140 | 240 | 1.5E-11 | IPR000210 |
| SMART | SM00875 | BACK_2 | 255 | 357 | 1.6E-7 | IPR011705 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 140 | 209 | 14.356354 | IPR000210 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G61600.1 | POZ/BTB containin G-protein 1. POZ/BTB containing-protein AtPOB1 | 0 |
| RefSeq | XP_040938746.1 | BTB/POZ domain-containing protein POB1-like [Gossypium hirsutum] | 0 |
| Q9FPW6 | BTB/POZ domain-containing protein POB1 OS=Arabidopsis thaliana OX=3702 GN=POB1 PE=1 SV=2 | 0 | |
| TrEMBL | A0A2P5XFR9 | BTB domain-containing protein OS=Gossypium barbadense OX=3634 GN=ES319_A12G117600v1 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology