Basic Information
Locus ID:
nbisL1-mrna-951
Species & Taxonomic ID:
Hibiscus hamabo Siebold & Zucc. & 1841
Description:
Leucine-rich repeat receptor-like protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 7762877 | 7769518 | + | nbisL1-mrna-951 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.50 | 105,009.86 Da | 29.56 | 86.73 | -0.19 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 640 | 906 | 2.61601E-98 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 638 | 902 | 4.3E-48 | IPR001245 |
| Pfam | PF13855 | Leucine rich repeat | 288 | 348 | 1.7E-7 | IPR001611 |
| SUPERFAMILY | SSF52058 | L domain-like | 41 | 388 | 6.46E-50 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 620 | 914 | 1.5E-78 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 605 | 709 | 3.7E-35 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 710 | 929 | 1.8E-58 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 27 | 181 | 1.1E-37 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 182 | 282 | 2.2E-15 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 283 | 405 | 1.1E-17 | IPR032675 |
| SMART | SM00220 | serkin_6 | 634 | 912 | 1.4E-33 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 634 | 907 | 38.350502 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 640 | 662 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 754 | 766 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G49760.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_038997006.1 | probable leucine-rich repeat receptor-like protein kinase At5g49770 [Hibiscus syriacus] | 0 |
| Q8GZ99 | Leucine-rich repeat receptor protein kinase HPCA1 OS=Arabidopsis thaliana OX=3702 GN=HPCA1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A6A3AUY3 | Putative leucine-rich repeat receptor-like protein kinase OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00110383pilonHSYRG00173 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology