halophFGD

Basic Information

Locus ID: nbisL1-mrna-9472

Species & Taxonomic ID: Ceriops zippeliana & 413951

Genome Assembly: GCA_037897445.1

Description: inositol 3-kinase activity

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
000011F_pilon	1063421	1064309	+	nbisL1-mrna-9472

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
6.73	20,090.35 Da	52.27	78.36	-0.34

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
CDD	cd16454	RING-H2_PA-TM-RING	86	129	5.25625E-19	-
Pfam	PF13639	Ring finger domain	86	129	8.9E-13	IPR001841
SUPERFAMILY	SSF57850	RING/U-box	81	137	2.47E-20	-
Gene3D	G3DSA:3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	70	135	7.2E-20	IPR013083
SMART	SM00184	ring_2	87	128	9.3E-6	IPR001841
ProSiteProfiles	PS50089	Zinc finger RING-type profile.	87	129	12.341748	IPR001841

KEGG Pathway

KO Term:

K19517 (1D-myo-inositol 3-kinase [EC:2.7.1.64])

Pathway:

ko00562 (Inositol phosphate metabolism) map00562 (Inositol phosphate metabolism) ko01100 (Metabolic pathways) map01100 (Metabolic pathways)

Reaction:

R07279 (ATP + myo-Inositol <=> ADP + 1D-myo-Inositol 3-phosphate)

Best hit

Source	Best Hit ID	Description
TAIR	AT5G17600.1	RING/U-box superfamily protein.
RefSeq	XP_042941004.1	RING-H2 finger protein ATL51-like [Carya illinoinensis]
Swiss-Prot	Q9LF64	RING-H2 finger protein ATL52 OS=Arabidopsis thaliana OX=3702 GN=ATL52 PE=2 SV=1
TrEMBL	A0A8T1PN48	RING-type domain-containing protein OS=Carya illinoinensis OX=32201 GN=CIPAW_09G190800 PE=4 SV=1

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

No network data available for this species.

Orthology

Family	Species	Count	Orthologous Genes
Apiaceae	Apium graveolens	1	Ag10G00766
Poaceae	Echinochloa crus-galli	7	AH04.1990, AH04.2286, AH06.708, BH04.2231, BH04.2361 ... CH04.2702, CH04.2705
Poaceae	Eleusine coracana subsp. coracana	3	gene-QOZ80_9AG0693130, gene-QOZ80_9BG0718900 ... gene-QOZ80_9BG0718910
Poaceae	Hordeum vulgare	2	HORVU.MOREX.r3.4HG0358530.1.CDS1 ... HORVU.MOREX.r3.4HG0358540.1.CDS1
Poaceae	Lolium multiflorum	6	gene-QYE76_014638, gene-QYE76_051889, gene-QYE76_051890 ... gene-QYE76_065466, gene-QYE76_065467, gene-QYE76_065469
Poaceae	Oryza coarctata	2	Oco21G010090, Oco22G011410
Poaceae	Oryza sativa	2	LOC_Os11g47690.1, LOC_Os11g47700.1
Poaceae	Paspalum vaginatum	13	gene-BS78_03G351000, gene-BS78_05G282700, gene-BS78_K266700 ... gene-BS78_05G283300, gene-BS78_05G284000, gene-BS78_05G284100, gene-BS78_05G284200, gene-BS78_K266800, gene-BS78_K267100, gene-BS78_K334300, gene-BS78_K334400, gene-BS78_K334500, gene-BS78_K334700
Poaceae	Puccinellia tenuiflora	1	Pt_Chr0604105
Poaceae	Sporobolus alterniflorus	2	Chr16G003990, Chr17G003690
Poaceae	Thinopyrum elongatum	2	Tel4E01G221800, Tel4E01G222000
Poaceae	Triticum dicoccoides	2	gene_TRIDC4AG028170, gene_TRIDC4BG022390
Poaceae	Triticum aestivum	7	TraesCS4A02G174400.1.cds1, TraesCS4A02G174500.1.cds1 ... TraesCS4A02G174600.1, TraesCS4B02G142800.1.cds1, TraesCS4B02G143100.1.cds1, TraesCS4D02G141100.1.cds1, TraesCS4D02G141200.1.cds1
Poaceae	Zea mays	5	Zm00001eb091480_P001, Zm00001eb164680_P001 ... Zm00001eb164690_P001, Zm00001eb164700_P001, Zm00001eb293380_P001
Poaceae	Zoysia japonica	2	nbis-gene-18460, nbis-gene-45969
Poaceae	Zoysia macrostachya	3	Zma_g18288, Zma_g18289, Zma_g19157
Rhizophoraceae	Bruguiera sexangula	1	evm.TU.Scaffold_2_RagTag.763
Rhizophoraceae	Ceriops zippeliana	1	nbisL1-mrna-9472
Rhizophoraceae	Rhizophora apiculata	1	nbisL1-mrna-21882