Basic Information
Locus ID:
nbisL1-mrna-9451
Species & Taxonomic ID:
Hibiscus hamabo Siebold & Zucc. & 1841
Description:
SH3 domain-containing protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2 | 63070678 | 63073417 | + | nbisL1-mrna-9451 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.75 | 41,764.83 Da | 44.80 | 75.98 | -0.58 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF14604 | Variant SH3 domain | 309 | 357 | 1.6E-11 | IPR001452 |
| SUPERFAMILY | SSF50044 | SH3-domain | 288 | 359 | 8.79E-17 | IPR036028 |
| SUPERFAMILY | SSF103657 | BAR/IMD domain-like | 47 | 258 | 4.04E-22 | IPR027267 |
| Gene3D | G3DSA:1.20.1270.60 | Arfaptin homology (AH) domain/BAR domain | 42 | 263 | 1.1E-8 | IPR027267 |
| Gene3D | G3DSA:2.30.30.40 | SH3 Domains | 292 | 366 | 2.3E-15 | - |
| SMART | SM00326 | SH3_2 | 305 | 360 | 7.3E-13 | IPR001452 |
| ProSiteProfiles | PS50002 | Src homology 3 (SH3) domain profile. | 302 | 361 | 19.769812 | IPR001452 |
| Coils | Coil | Coil | 149 | 172 | - | - |
| Coils | Coil | Coil | 186 | 227 | - | - |
| Coils | Coil | Coil | 1 | 21 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G34660.1 | SH3 domain-containing protein. | 0 |
| RefSeq | XP_039026491.1 | SH3 domain-containing protein 2-like [Hibiscus syriacus] | 0 |
| Q8VWF1 | SH3 domain-containing protein 2 OS=Arabidopsis thaliana OX=3702 GN=SH3P2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A6A2XWB4 | Detected protein of confused Function OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00111392pilonHSYRG00163 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology