Basic Information
Locus ID:
nbisL1-mrna-9441
Species & Taxonomic ID:
Hibiscus hamabo Siebold & Zucc. & 1841
Short Name:
SnRK2.3
Description:
Belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2 | 62983844 | 62985284 | + | nbisL1-mrna-9441 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.81 | 14,471.58 Da | 31.00 | 101.27 | -0.24 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 23 | 119 | 1.5E-20 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 15 | 120 | 2.11E-28 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 5 | 98 | 6.9E-40 | - |
| SMART | SM00220 | serkin_6 | 23 | 126 | 7.8E-5 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 23 | 126 | 16.89509 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 29 | 52 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G33950.2 | Protein kinase superfamily protein. Encodes calcium-independent ABA-activated protein kinase, a member of SNF1-related protein kinases (SnRK2) whose activity is activated by ionic (salt) and non-ionic (mannitol) osmotic stress. Mutations disrupted ABA induction of stomatal closure as well as ABA inhibition of light-induced stomatal opening. However, regulation of stomatal opening/closing by light or CO(2) is not affected in these mutants. May act in the interval between ABA perception and reactive oxygen species production in the ABA signalling network. | 0 |
| RefSeq | XP_039001785.1 | serine/threonine-protein kinase SRK2E-like [Hibiscus syriacus] | 0 |
| Q75H77 | Serine/threonine-protein kinase SAPK10 OS=Oryza sativa subsp. japonica OX=39947 GN=SAPK10 PE=1 SV=1 | 0 | |
| TrEMBL | A0A7J9J4M8 | Protein kinase domain-containing protein OS=Gossypium armourianum OX=34283 GN=Goarm_013686 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Amaranthaceae | Suaeda glauca | 5 | Sgl02968, Sgl04141, Sgl08058, Sgl09200, Sgl53193 |
| Anacardiaceae | Pistacia vera | 1 | pistato.v30064480 |
| Arecaceae | Cocos nucifera | 1 | scaffold027032G000010 |
| Brassicaceae | Brassica nigra | 1 | BniB03g057660.2N |
| Hydrocharitaceae | Thalassia testudinum | 1 | gene.Thate03g17300 |
| Malvaceae | Hibiscus hamabo Siebold & Zucc. | 1 | nbisL1-mrna-9441 |
| Plumbaginaceae | Limonium bicolor | 3 | Lb2G08624, Lb2G13984, Lb7G34421 |
| Poaceae | Echinochloa crus-galli | 1 | BH01.3777 |
| Poaceae | Eleusine coracana subsp. coracana | 1 | gene-QOZ80_3BG0278430 |
| Poaceae | Hordeum vulgare | 1 | HORVU.MOREX.r3.4HG0414820.1 |
| Poaceae | Zoysia japonica | 2 | nbis-gene-11250, nbis-gene-12098 |
| Solanaceae | Solanum chilense | 1 | SOLCI006160200 |