Basic Information
Locus ID:
nbisL1-mrna-9420
Species & Taxonomic ID:
Carallia pectinifolia & 98586
Genome Assembly:
GCA_037832335.1
Description:
DnaJ domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr04 | 13632323 | 13634307 | + | nbisL1-mrna-9420 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.20 | 37,871.54 Da | 47.85 | 72.14 | -0.57 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd06257 | DnaJ | 68 | 121 | 3.97175E-20 | IPR001623 |
| CDD | cd15489 | PHD_SF | 193 | 241 | 0.00459494 | - |
| Pfam | PF00226 | DnaJ domain | 68 | 129 | 6.4E-19 | IPR001623 |
| SUPERFAMILY | SSF46565 | Chaperone J-domain | 62 | 132 | 7.85E-19 | IPR036869 |
| Gene3D | G3DSA:1.10.287.110 | DnaJ domain | 54 | 142 | 2.1E-20 | IPR036869 |
| SMART | SM00271 | dnaj_3 | 67 | 124 | 4.0E-21 | IPR001623 |
| ProSiteProfiles | PS50076 | dnaJ domain profile. | 68 | 132 | 15.336654 | IPR001623 |
| PRINTS | PR00625 | DnaJ domain signature | 104 | 124 | 1.9E-10 | IPR001623 |
| PRINTS | PR00625 | DnaJ domain signature | 88 | 103 | 1.9E-10 | IPR001623 |
| PRINTS | PR00625 | DnaJ domain signature | 70 | 88 | 1.9E-10 | IPR001623 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 146 | 181 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 283 | 341 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 157 | 181 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G01710.1 | Chaperone DnaJ-domain superfamily protein. | 0 |
| RefSeq | XP_021601873.2 | uncharacterized protein LOC110607111 [Manihot esculenta] | 0 |
| Q17438 | DnaJ homolog subfamily B member 1 OS=Caenorhabditis elegans OX=6239 GN=dnj-1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2P2JYL0 | Uncharacterized protein MANES_02G145200 OS=Rhizophora mucronata OX=61149 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology