Basic Information
Locus ID:
nbisL1-mrna-942
Species & Taxonomic ID:
Hibiscus hamabo Siebold & Zucc. & 1841
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 7684643 | 7688027 | - | nbisL1-mrna-942 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.52 | 109,569.52 Da | 33.78 | 104.31 | -0.03 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13855 | Leucine rich repeat | 136 | 195 | 4.3E-9 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 21 | 60 | 8.2E-14 | IPR013210 |
| Pfam | PF00560 | Leucine Rich Repeat | 546 | 567 | 1.5 | IPR001611 |
| Pfam | PF00560 | Leucine Rich Repeat | 113 | 134 | 1.1 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 680 | 905 | 4.0E-42 | IPR000719 |
| SUPERFAMILY | SSF52047 | RNI-like | 68 | 374 | 1.96E-59 | - |
| SUPERFAMILY | SSF52047 | RNI-like | 262 | 586 | 5.89E-57 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 669 | 964 | 2.02E-72 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 662 | 771 | 1.9E-22 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 772 | 982 | 1.3E-58 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 306 | 611 | 1.0E-81 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 176 | 299 | 5.7E-30 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 20 | 175 | 1.2E-49 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 543 | 566 | 55.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 280 | 304 | 61.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 87 | 111 | 32.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 495 | 519 | 66.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 678 | 987 | 6.1E-34 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 135 | 158 | 63.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 232 | 256 | 170.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 678 | 973 | 37.248051 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 684 | 707 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 816 | 828 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G28440.1 | HAESA-like 1. | 0 |
| RefSeq | XP_017607162.1 | PREDICTED: receptor-like protein kinase HSL1 [Gossypium arboreum] | 0 |
| Q9SGP2 | Receptor-like protein kinase HSL1 OS=Arabidopsis thaliana OX=3702 GN=HSL1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8J6D489 | Protein kinase domain-containing protein OS=Gossypium anomalum OX=47600 GN=CXB51_012176 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology