Basic Information
Locus ID:
nbisL1-mrna-9376
Species & Taxonomic ID:
Ceriops zippeliana & 413951
Genome Assembly:
GCA_037897445.1
Description:
Translocase of chloroplast
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 000011F_pilon | 509932 | 513384 | + | nbisL1-mrna-9376 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.01 | 125,351.17 Da | 47.16 | 84.02 | -0.47 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd01853 | Toc34_like | 494 | 736 | 2.45999E-135 | - |
| Pfam | PF11886 | Translocase of chloroplast 159/132, membrane anchor domain | 877 | 1140 | 3.5E-120 | IPR024283 |
| Pfam | PF04548 | AIG1 family | 519 | 653 | 4.3E-28 | IPR006703 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 515 | 653 | 3.21E-17 | IPR027417 |
| Gene3D | G3DSA:3.40.50.300 | - | 492 | 738 | 2.8E-56 | IPR027417 |
| TIGRFAM | TIGR00993 | 3a0901s04IAP86: chloroplast protein import component Toc86/159, G and M domains | 395 | 1145 | 0.0 | IPR005690 |
| ProSiteProfiles | PS51720 | AIG1-type G domain profile. | 516 | 745 | 32.299561 | IPR006703 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 37 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 855 | 869 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 34 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 855 | 878 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 58 | 88 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 67 | 88 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 107 | 150 | - | - |
| Coils | Coil | Coil | 42 | 62 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G16640.1 | multimeric translocon complex in the outer envelope membrane 132. | 0 |
| RefSeq | XP_021650247.1 | translocase of chloroplast 120, chloroplastic-like [Hevea brasiliensis] | 0 |
| Q9SLF3 | Translocase of chloroplast 132, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=TOC132 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2P2LUC2 | Protein translocase OS=Rhizophora mucronata OX=61149 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology