Basic Information
Locus ID:
nbisL1-mrna-9322
Species & Taxonomic ID:
Hibiscus hamabo Siebold & Zucc. & 1841
Description:
belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2 | 61920947 | 61924124 | + | nbisL1-mrna-9322 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.16 | 54,113.02 Da | 41.32 | 93.38 | -0.35 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 175 | 443 | 1.3E-48 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 157 | 453 | 5.13E-83 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 154 | 249 | 1.4E-33 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 250 | 462 | 1.0E-63 | - |
| SMART | SM00220 | serkin_6 | 174 | 450 | 7.2E-42 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 174 | 450 | 37.940617 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 296 | 308 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 180 | 203 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 466 | 483 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 445 | 483 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 449 | 465 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G18500.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_039038498.1 | probable receptor-like protein kinase At5g18500 [Hibiscus syriacus] | 0 |
| Q8LEB6 | Probable receptor-like protein kinase At5g18500 OS=Arabidopsis thaliana OX=3702 GN=At5g18500 PE=2 SV=1 | 0 | |
| TrEMBL | A0A6A2X471 | Putative serine/threonine-protein kinase OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00112226pilonHSYRG00058 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology