Basic Information
Locus ID:
nbisL1-mrna-9304
Species & Taxonomic ID:
Carallia pectinifolia & 98586
Genome Assembly:
GCA_037832335.1
Description:
f-box protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr04 | 12180093 | 12182021 | - | nbisL1-mrna-9304 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.08 | 60,376.02 Da | 39.39 | 91.27 | -0.07 |
Protein Domain:
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G17570.1 | F-box and associated interaction domains-containing protein. | 0 |
| RefSeq | XP_011461336.1 | PREDICTED: F-box/kelch-repeat protein At3g06240-like [Fragaria vesca subsp. vesca] | 0 |
| Q9LUP1 | Putative F-box/kelch-repeat protein At3g17570 OS=Arabidopsis thaliana OX=3702 GN=At3g17570 PE=4 SV=1 | 0 | |
| TrEMBL | A0A2P6QHQ8 | - | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Rhizophoraceae | Bruguiera sexangula | 1 | evm.TU.Scaffold_6_RagTag.2221 |
| Rhizophoraceae | Carallia pectinifolia | 4 | nbisL1-mrna-18013, nbisL1-mrna-18017, nbisL1-mrna-18018 ... |
| Rhizophoraceae | Ceriops zippeliana | 1 | nbisL1-mrna-8373 |
| Rhizophoraceae | Kandelia candel | 1 | add.evm.TU.utg000007l.102 |
| Rhizophoraceae | Rhizophora apiculata | 1 | nbisL1-mrna-23281 |
| Rhizophoraceae | Rhizophora mangle | 1 | nbisL1-mrna-10746 |