Basic Information
Locus ID:
nbisL1-mrna-9249
Species & Taxonomic ID:
Rhizophora mangle & 40031
Genome Assembly:
GCA_037832345.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 000193F_pilon | 570562 | 574227 | + | nbisL1-mrna-9249 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.52 | 63,267.49 Da | 40.20 | 97.53 | -0.14 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 239 | 505 | 8.5E-43 | IPR001245 |
| Pfam | PF13855 | Leucine rich repeat | 56 | 116 | 4.9E-14 | IPR001611 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 217 | 506 | 7.93E-75 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 16 | 130 | 6.24E-29 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 313 | 524 | 1.5E-59 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 1 | 147 | 5.7E-40 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 205 | 312 | 2.9E-35 | - |
| SMART | SM00369 | LRR_typ_2 | 79 | 102 | 14.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 236 | 505 | 3.4E-31 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 55 | 78 | 2.5 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 103 | 130 | 290.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 31 | 53 | 240.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 236 | 491 | 34.74633 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 242 | 264 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 355 | 367 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G30520.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_021667211.1 | probable LRR receptor-like serine/threonine-protein kinase At2g23950 isoform X3 [Hevea brasiliensis] | 0 |
| Q8VYT3 | Probable LRR receptor-like serine/threonine-protein kinase At4g30520 OS=Arabidopsis thaliana OX=3702 GN=At4g30520 PE=1 SV=1 | 0 | |
| TrEMBL | A0A836IXA8 | Leucine-rich repeat family protein OS=Salix suchowensis OX=1278906 GN=IMY05_006G0143400 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology