Basic Information
Locus ID:
nbisL1-mrna-9243
Species & Taxonomic ID:
Ceriops zippeliana & 413951
Genome Assembly:
GCA_037897445.1
Description:
PB1 domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 000004F_pilon | 4162298 | 4169192 | - | nbisL1-mrna-9243 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.37 | 155,811.06 Da | 49.87 | 80.30 | -0.46 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd13999 | STKc_MAP3K-like | 1047 | 1300 | 4.90964E-108 | - |
| CDD | cd06410 | PB1_UP2 | 183 | 278 | 9.5858E-42 | - |
| Pfam | PF00564 | PB1 domain | 196 | 279 | 1.4E-17 | IPR000270 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 1042 | 1299 | 3.1E-60 | IPR001245 |
| SUPERFAMILY | SSF54277 | CAD & PB1 domains | 195 | 284 | 4.61E-20 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 1028 | 1300 | 5.74E-75 | IPR011009 |
| Gene3D | G3DSA:3.10.20.90 | - | 198 | 279 | 4.3E-10 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 1034 | 1128 | 1.6E-25 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 1129 | 1331 | 1.0E-50 | - |
| SMART | SM00666 | PB1_new | 194 | 280 | 1.1E-27 | IPR000270 |
| SMART | SM00220 | serkin_6 | 1041 | 1300 | 1.6E-58 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1041 | 1302 | 39.69323 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 1166 | 1178 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 1047 | 1072 | - | IPR017441 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 1123 | 1136 | 5.7E-13 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 1227 | 1249 | 5.7E-13 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 1271 | 1293 | 5.7E-13 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 1160 | 1178 | 5.7E-13 | IPR001245 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 153 | 172 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G35050.1 | Protein kinase superfamily protein with octicosapeptide/Phox/Bem1p domain. | 0 |
| RefSeq | XP_011018312.1 | PREDICTED: uncharacterized protein LOC105121394 [Populus euphratica] | 0 |
| O64768 | RAF-like serine/threonine-protein kinase 24 OS=Arabidopsis thaliana OX=3702 GN=RAF24 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2P2M002 | Protein kinase domain-containing protein OS=Rhizophora mucronata OX=61149 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology