Basic Information
Locus ID:
nbisL1-mrna-9149
Species & Taxonomic ID:
Ceriops zippeliana & 413951
Genome Assembly:
GCA_037897445.1
Description:
BEST Arabidopsis thaliana protein match is
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 000004F_pilon | 3131248 | 3138867 | + | nbisL1-mrna-9149 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.38 | 90,136.07 Da | 46.44 | 67.28 | -0.90 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF48371 | ARM repeat | 39 | 258 | 7.68E-9 | IPR016024 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 647 | 833 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 495 | 527 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 799 | 833 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 726 | 763 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 446 | 484 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 764 | 798 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 544 | 619 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 312 | 357 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 271 | 619 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 674 | 708 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G31880.1 | 0 | |
| RefSeq | XP_043807719.1 | titin homolog isoform X2 [Manihot esculenta] | 0 |
| Q8GUP3 | Sister chromatid cohesion protein PDS5 homolog C OS=Arabidopsis thaliana OX=3702 GN=PDS5C PE=1 SV=1 | 0 | |
| TrEMBL | A0A2P2LRD6 | Tudor domain-containing protein OS=Rhizophora mucronata OX=61149 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology