Basic Information
Locus ID:
nbisL1-mrna-9100
Species & Taxonomic ID:
Ceriops zippeliana & 413951
Genome Assembly:
GCA_037897445.1
Short Name:
EBF2
Description:
EIN3-binding F-box protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 000004F_pilon | 2776602 | 2780646 | + | nbisL1-mrna-9100 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.95 | 70,025.35 Da | 42.88 | 104.82 | 0.17 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00646 | F-box domain | 67 | 107 | 1.3E-6 | IPR001810 |
| Pfam | PF13516 | Leucine Rich repeat | 277 | 300 | 1.3 | IPR001611 |
| Pfam | PF13516 | Leucine Rich repeat | 226 | 249 | 0.14 | IPR001611 |
| Pfam | PF13516 | Leucine Rich repeat | 573 | 592 | 0.082 | IPR001611 |
| SUPERFAMILY | SSF81383 | F-box domain | 63 | 103 | 1.83E-8 | IPR036047 |
| SUPERFAMILY | SSF52047 | RNI-like | 308 | 651 | 5.1E-32 | - |
| SUPERFAMILY | SSF52047 | RNI-like | 184 | 426 | 1.94E-34 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 541 | 654 | 3.5E-17 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 104 | 251 | 5.4E-16 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 457 | 540 | 9.0E-13 | IPR032675 |
| Gene3D | G3DSA:1.20.1280.50 | - | 60 | 103 | 1.2E-6 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 252 | 456 | 8.5E-36 | IPR032675 |
| SMART | SM00367 | LRR_CC_2 | 252 | 277 | 2.4E-4 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 570 | 594 | 0.043 | IPR006553 |
| SMART | SM00256 | fbox_2 | 70 | 110 | 0.0012 | IPR001810 |
| SMART | SM00367 | LRR_CC_2 | 226 | 251 | 8.8E-6 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 464 | 489 | 8.9E-4 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 490 | 515 | 8.4 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 517 | 544 | 220.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 410 | 435 | 630.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 596 | 621 | 0.74 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 384 | 409 | 5.0E-4 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 200 | 225 | 0.17 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 278 | 303 | 5.3E-4 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 547 | 569 | 28.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 358 | 383 | 0.18 | IPR006553 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G25490.1 | EIN3-binding F box protein 1. Encodes an F-box protein involved in the ubiquitin/proteasome-dependent proteolysis of EIN3. | 0 |
| RefSeq | XP_021605992.1 | EIN3-binding F-box protein 1 [Manihot esculenta] | 0 |
| Q9SKK0 | EIN3-binding F-box protein 1 OS=Arabidopsis thaliana OX=3702 GN=EBF1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2P2K6Y0 | Grr1 plant OS=Rhizophora mucronata OX=61149 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology