Basic Information
Locus ID:
nbisL1-mrna-9094
Species & Taxonomic ID:
Rhizophora mangle & 40031
Genome Assembly:
GCA_037832345.1
Short Name:
FLS2
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 002106F_pilon | 3964740 | 3968471 | - | nbisL1-mrna-9094 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.45 | 110,579.87 Da | 31.22 | 110.92 | 0.10 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 30 | 67 | 6.4E-11 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 551 | 610 | 1.7E-7 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 383 | 441 | 1.3E-6 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 897 | 1011 | 9.8E-10 | IPR000719 |
| Pfam | PF13855 | Leucine rich repeat | 651 | 709 | 3.2E-10 | IPR001611 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 892 | 1014 | 1.38E-17 | IPR011009 |
| SUPERFAMILY | SSF52047 | RNI-like | 75 | 395 | 8.63E-59 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 628 | 688 | 1.87E-10 | - |
| SUPERFAMILY | SSF52047 | RNI-like | 341 | 759 | 1.65E-63 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 458 | 692 | 3.0E-69 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 183 | 272 | 9.2E-23 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 384 | 455 | 2.5E-17 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 869 | 1020 | 1.7E-24 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 693 | 793 | 3.6E-29 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 273 | 383 | 5.1E-30 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 27 | 182 | 5.3E-43 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 93 | 117 | 270.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 573 | 596 | 120.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 429 | 453 | 79.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 381 | 405 | 27.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 141 | 165 | 43.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 696 | 719 | 320.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 525 | 549 | 22.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 671 | 695 | 400.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 597 | 621 | 41.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 477 | 501 | 73.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 285 | 309 | 7.0 | IPR003591 |
| SMART | SM00365 | LRR_sd22_2 | 357 | 380 | 650.0 | - |
| SMART | SM00365 | LRR_sd22_2 | 285 | 306 | 560.0 | - |
| SMART | SM00365 | LRR_sd22_2 | 720 | 746 | 130.0 | - |
| SMART | SM00365 | LRR_sd22_2 | 213 | 239 | 130.0 | - |
| SMART | SM00365 | LRR_sd22_2 | 381 | 407 | 110.0 | - |
| SMART | SM00365 | LRR_sd22_2 | 477 | 503 | 170.0 | - |
| SMART | SM00369 | LRR_typ_2 | 213 | 237 | 31.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 333 | 356 | 310.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 647 | 670 | 300.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 720 | 743 | 41.0 | IPR003591 |
| PRINTS | PR00019 | Leucine-rich repeat signature | 720 | 733 | 2.1E-5 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 600 | 613 | 2.1E-5 | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G46330.1 | Leucine-rich receptor-like protein kinase family protein. Encodes a leucine-rich repeat serine/threonine protein kinase that is expressed ubiquitously. FLS2 is involved in MAP kinase signalling relay involved in innate immunity. Essential in the perception of flagellin, a potent elicitor of the defense response. FLS2 is directed for degradation by the bacterial ubiquitin ligase AvrPtoB. | 0 |
| RefSeq | XP_021686159.1 | LRR receptor-like serine/threonine-protein kinase FLS2 [Hevea brasiliensis] | 0 |
| Q9FL28 | LRR receptor-like serine/threonine-protein kinase FLS2 OS=Arabidopsis thaliana OX=3702 GN=FLS2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A127AU84 | LRR-RLK (Fragment) OS=Vernicia fordii OX=73154 PE=2 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 1 | jg25002 |
| Amaranthaceae | Atriplex hortensis | 1 | Ah016593 |
| Apiaceae | Apium graveolens | 2 | Ag6G01107, Ag7G00868 |
| Arecaceae | Cocos nucifera | 1 | COCNU_02G018220 |
| Asparagaceae | Asparagus officinalis | 7 | AsparagusV1_01.1982.V1.1, AsparagusV1_02.1875.V1.1 ... |
| Poaceae | Zoysia japonica | 1 | nbis-gene-5862 |
| Rhizophoraceae | Carallia pectinifolia | 1 | nbisL1-mrna-24943 |
| Rhizophoraceae | Ceriops zippeliana | 1 | nbisL1-mrna-17193 |
| Rhizophoraceae | Kandelia candel | 1 | add.evm.TU.utg000022l.52 |
| Rhizophoraceae | Kandelia obovata | 1 | Maker00012202 |
| Rhizophoraceae | Rhizophora mangle | 1 | nbisL1-mrna-9094 |