Basic Information
Locus ID:
nbisL1-mrna-9058
Species & Taxonomic ID:
Carallia pectinifolia & 98586
Genome Assembly:
GCA_037832335.1
Description:
Jacalin-like lectin domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr04 | 8695758 | 8701257 | - | nbisL1-mrna-9058 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.71 | 65,354.58 Da | 35.62 | 67.68 | -0.41 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd09612 | Jacalin | 453 | 582 | 5.27367E-39 | IPR033734 |
| CDD | cd09612 | Jacalin | 254 | 383 | 4.46023E-40 | IPR033734 |
| CDD | cd09612 | Jacalin | 25 | 153 | 1.97302E-47 | IPR033734 |
| Pfam | PF01419 | Jacalin-like lectin domain | 450 | 582 | 4.0E-31 | IPR001229 |
| Pfam | PF01419 | Jacalin-like lectin domain | 254 | 383 | 1.2E-31 | IPR001229 |
| Pfam | PF01419 | Jacalin-like lectin domain | 27 | 155 | 1.5E-34 | IPR001229 |
| SUPERFAMILY | SSF51101 | Mannose-binding lectins | 439 | 581 | 5.76E-41 | IPR036404 |
| SUPERFAMILY | SSF51101 | Mannose-binding lectins | 244 | 383 | 1.57E-40 | IPR036404 |
| SUPERFAMILY | SSF51101 | Mannose-binding lectins | 15 | 156 | 4.32E-45 | IPR036404 |
| Gene3D | G3DSA:2.100.10.30 | - | 5 | 154 | 1.2E-58 | IPR036404 |
| Gene3D | G3DSA:2.100.10.30 | - | 435 | 582 | 1.4E-50 | IPR036404 |
| Gene3D | G3DSA:2.100.10.30 | - | 231 | 384 | 8.1E-51 | IPR036404 |
| SMART | SM00915 | Jacalin_2 | 450 | 583 | 2.3E-44 | IPR001229 |
| SMART | SM00915 | Jacalin_2 | 25 | 156 | 3.1E-46 | IPR001229 |
| SMART | SM00915 | Jacalin_2 | 254 | 385 | 6.3E-43 | IPR001229 |
| ProSiteProfiles | PS51752 | Jacalin-type lectin domain profile. | 14 | 156 | 55.091362 | IPR001229 |
| ProSiteProfiles | PS51752 | Jacalin-type lectin domain profile. | 243 | 385 | 52.305737 | IPR001229 |
| ProSiteProfiles | PS51752 | Jacalin-type lectin domain profile. | 439 | 583 | 49.520115 | IPR001229 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G19715.1 | Mannose-binding lectin superfamily protein. | 0 |
| RefSeq | XP_021636642.1 | jacalin-related lectin 3-like [Hevea brasiliensis] | 0 |
| F4HQX1 | Jacalin-related lectin 3 OS=Arabidopsis thaliana OX=3702 GN=JAL3 PE=2 SV=1 | 0 | |
| TrEMBL | A0A2P2IXV7 | Pentatricopeptide repeat-containing protein OS=Rhizophora mucronata OX=61149 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology